RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 NR1H4Q96RI1 486 aaPredicted RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 BARHL1Q9BZE3 327 aa7.77□□□□□ -1.17
VPS41-201ENST00000265745 PPIL3Q9H2H8 161 aaKnown RBP7.77□□□□□ -1.17
VPS41-201ENST00000265745 MEIKINA0A087WXM9 373 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 OOSP1A8MZH6 123 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 GABRPO00591 440 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 HSPB6O14558 160 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 MAGEB3O15480 346 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 XPNPEP2O43895 674 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 OR2F2O95006 317 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 AMY1AP04745 511 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 AMY2AP04746 511 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 DCKP27707 260 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 C21orf33P30042 268 aaPredicted RBP7.76□□□□□ -1.17
VPS41-201ENST00000265745 CEACAM3P40198 252 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 OR3A4PP47883 348 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 ETV1P50549 477 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 PAX5Q02548 391 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 IL13RA2Q14627 380 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 RSU1Q15404 277 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 ZSCAN26Q16670 478 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 FBLN7Q53RD9 439 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 PAN3Q58A45 887 aaKnown RBP7.76□□□□□ -1.17
VPS41-201ENST00000265745 TCTEX1D4Q5JR98 221 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 RPL22L1Q6P5R6 122 aaKnown RBP7.76□□□□□ -1.17
VPS41-201ENST00000265745 SATL1Q86VE3 508 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 WFDC9Q8NEX5 89 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 OR13A1Q8NGR1 328 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 OR9G1Q8NH87 305 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 TNFAIP8L1Q8WVP5 186 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 CPNE2Q96FN4 548 aaPredicted RBP7.76□□□□□ -1.17
VPS41-201ENST00000265745 RBM14Q96PK6 669 aaKnown RBP7.76□□□□□ -1.17
VPS41-201ENST00000265745 GPER1Q99527 375 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 IFT22Q9H7X7 185 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 TMEM138Q9NPI0 162 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 BABAM2Q9NXR7 383 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 TAS2R4Q9NYW5 299 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 CALYQ9NYX4 217 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 KIF25Q9UIL4 384 aa7.76□□□□□ -1.17
VPS41-201ENST00000265745 SIRT4Q9Y6E7 314 aaPredicted RBP7.76□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A18PA6NE21 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A16PA6NEW6 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A20PA6NIJ5 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A9PA6NNJ1 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A12PA8MX19 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A5PA8MXJ8 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 NPIPB11E5RHQ5 1161 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 EBAG9O00559 213 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 OGG1O15527 345 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 CDRT1O95170 752 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 BAG2O95816 211 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 PRB2P02812 416 aaPredicted RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 CD2P06729 351 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 LPLP06858 475 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A15PP0C7V4 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A13PP0C7W8 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A14PP0C7W9 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM90A24PP0C7X0 464 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 FAM106CPP0CH98 169 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 NFYBP25208 207 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 MNDAP41218 407 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 GLP1RP43220 463 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 KCNJ3P48549 501 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 RBM39Q14498 530 aaKnown RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 PIGYQ3MUY2 71 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 ABCA11PQ4W5N1 156 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 OR2G6Q5TZ20 316 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 RSBN1Q5VWQ0 802 aaPredicted RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 CCDC144NLQ6NUI1 221 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 TMPRSS11AQ6ZMR5 421 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 CENPVQ7Z7K6 275 aaPredicted RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 OR10K1Q8NGX5 313 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 RFESDQ8TAC1 157 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 CAPSLQ8WWF8 208 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 TMEM106AQ96A25 262 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 RDH12Q96NR8 316 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 SMPD3Q9NY59 655 aaPredicted RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.75□□□□□ -1.17
VPS41-201ENST00000265745 ZNF581Q9P0T4 197 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 PSG11Q9UQ72 335 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 ZNF281Q9Y2X9 895 aa7.75□□□□□ -1.17
VPS41-201ENST00000265745 J3QR06 171 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 M0QZK8 103 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 CLIC3O95833 236 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 IL1AP01583 271 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 IGHV3-7P01780 117 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 NAT1P18440 290 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 ZNF93P35789 620 aaPredicted RBP7.74□□□□□ -1.17
VPS41-201ENST00000265745 NHLRC3Q5JS37 347 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 DMKNQ6E0U4 476 aaPredicted RBP7.74□□□□□ -1.17
VPS41-201ENST00000265745 SUMF2Q8NBJ7 301 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 ZNF555Q8NEP9 628 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 PLPPR1Q8TBJ4 325 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 MRGPRDQ8TDS7 321 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 GHSRQ92847 366 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 LEAP2Q969E1 77 aa7.74□□□□□ -1.17
VPS41-201ENST00000265745 RPEQ96AT9 228 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms