RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 MALRD1Q5VYJ5 2156 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FN1P02751 2386 aaKnown RBP10.59□□□□□ -0.71
SGCE-201ENST00000265735 TLN2Q9Y4G6 2542 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A10PA6NDY2 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A18PA6NE21 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A16PA6NEW6 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A20PA6NIJ5 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A8PA6NJQ4 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A7PA6NKC0 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A22PA8MWA6 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A12PA8MX19 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A5PA8MXJ8 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A23PA8MXZ1 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 INAFM1C9JVW0 142 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 IFNL4K9M1U5 179 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A15PP0C7V4 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A13PP0C7W8 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A14PP0C7W9 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 FAM90A24PP0C7X0 464 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 HAAOP46952 286 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 OR3A3P47888 321 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 RBM11P57052 281 aaKnown RBP10.59□□□□□ -0.71
SGCE-201ENST00000265735 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 ATPAF1Q5TC12 328 aaPredicted RBP10.59□□□□□ -0.71
SGCE-201ENST00000265735 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 Q8NFD4 153 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 ZFAND1Q8TCF1 268 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 ZNF431Q8TF32 576 aaPredicted RBP10.59□□□□□ -0.71
SGCE-201ENST00000265735 RAB1CQ92928 201 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 EMG1Q92979 244 aaKnown RBP10.59□□□□□ -0.71
SGCE-201ENST00000265735 TIMD4Q96H15 378 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 ST6GALNAC5Q9BVH7 336 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 ST3GAL6Q9Y274 331 aa10.59□□□□□ -0.71
SGCE-201ENST00000265735 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.725e-9■■■■■ 37
SGCE-201ENST00000265735 HIVEP2P31629 2446 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 FAM172BPA6NC97 362 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 TMEM178BH3BS89 294 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 IGHV2-70P01814 119 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 SFTPBP07988 381 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 OR4E1P0C645 316 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 CHATP28329 748 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 RBMXP38159 391 aaKnown RBP10.58□□□□□ -0.72
SGCE-201ENST00000265735 PMELP40967 661 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 SNU13P55769 128 aaKnown RBP10.58□□□□□ -0.72
SGCE-201ENST00000265735 GNG3P63215 75 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 CDK10Q15131 360 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 OR8G1Q15617 311 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 PIGYQ3MUY2 71 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 CHRFAM7AQ494W8 412 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 SIGIRRQ6IA17 410 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 ELP2Q6IA86 826 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 SPERTQ8NA61 448 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 OR52B4Q8NGK2 314 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 ERGIC1Q969X5 290 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 SCGB3A2Q96PL1 93 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 ADAT1Q9BUB4 502 aaKnown RBP10.58□□□□□ -0.72
SGCE-201ENST00000265735 CHST6Q9GZX3 395 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 YAE1D1Q9NRH1 226 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 TMEM160Q9NX00 188 aa10.58□□□□□ -0.72
SGCE-201ENST00000265735 ANK3Q12955 4377 aaKnown RBP10.58□□□□□ -0.72
SGCE-201ENST00000265735 TRAPPC2LH3BP13 241 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 H3BUI4 141 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 GEMIN2O14893 280 aaKnown RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 PDCD6O75340 191 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 FSTL3O95633 263 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 ZNF16P17020 682 aaPredicted RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 DTYMKP23919 212 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 TSPAN5P62079 268 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 FAHD2BQ6P2I3 314 aaPredicted RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 PEG10Q86TG7 708 aaKnown RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 SLC25A42Q86VD7 318 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 MUC20Q8N307 709 aaPredicted RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 LINC01356Q8N9X3 169 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 OR5AP2Q8NGF4 316 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 TERB2Q8NHR7 220 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 Q8TCH9 128 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 FAHD2AQ96GK7 314 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 CMSS1Q9BQ75 279 aaKnown RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 FAAP24Q9BTP7 215 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 RTL8AQ9BWD3 113 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
SGCE-201ENST00000265735 NARFLQ9H6Q4 476 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
SGCE-201ENST00000265735 FAM157AC9JC47 383 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 FUT3P21217 361 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 TAS2R31P59538 309 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 FGF12P61328 243 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 MPPED2Q15777 294 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 NHLRC3Q5JS37 347 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 NLRC3Q7RTR2 1065 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 MOGAT3Q86VF5 341 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 ASB13Q8WXK3 278 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 SLAMF9Q96A28 289 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 MICU1Q9BPX6 476 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 PKIBQ9C010 78 aa10.57□□□□□ -0.72
SGCE-201ENST00000265735 PPA2Q9H2U2 334 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms