RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ASPDHA6ND91 283 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ALOX12BO75342 701 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 PCBP3P57721 371 aaKnown RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 LSM6P62312 80 aaKnown RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 CDKN3Q16667 212 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TMEM97Q5BJF2 176 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 SLC25A34Q6PIV7 304 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H2BLQ99880 126 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ZNF816-ZNF321PA0A0X1KG74 233 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ARPC3O15145 178 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TMEM33P57088 247 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 DMWDQ09019 674 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TRA2AQ13595 282 aaKnown RBP eCLIP5.07□□□□□ -1.6
VCAN-201ENST00000265077 Q7L0L9 218 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 C16orf82Q7Z2V1 217 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 LILRA3Q8N6C8 439 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 C11orf40Q8WZ69 217 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 BOD1Q96IK1 185 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 FER1L6-AS2Q96M78 137 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 NDFIP1Q9BT67 221 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TRAV39A0A0B4J263 110 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 UBE2L5PA0A1B0GUS4 154 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 A0A1W2PRS3 328 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 GALR2O43603 387 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 FUT3P21217 361 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 VASH2Q86V25 355 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 GPR32P1Q8NGA4 272 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 NRSN2Q9GZP1 204 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 LRP12Q9Y561 859 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 SIP14410 1827 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 SHANK3Q9BYB0 1731 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 MUC6Q6W4X9 2439 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 M0R296 226 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ZNF121P58317 390 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 RAB32Q13637 225 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 RPEL1Q2QD12 228 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 Q6ZNB5 142 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 IP6K3Q96PC2 410 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TECTAO75443 2155 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 LOC285556D6RIA3 1793 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 IGLV3-16A0A075B6K0 115 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ZNF737O75373 536 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 MRPL58Q14197 206 aaKnown RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 MYPOPQ86VE0 399 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 ZNF707Q96C28 371 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 CXCL16Q9H2A7 254 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 IL21Q9HBE4 155 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 ABCA2Q9BZC7 2435 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 NXPH3O95157 252 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 UMODP07911 640 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 CD1CP29017 333 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TM4SF4P48230 202 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 TFPI2P48307 235 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 RTN4RL1Q86UN2 441 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 TMEM178AQ8NBL3 297 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 HMGCLL1Q8TB92 370 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 OR2M5A3KFT3 312 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 KLRC4-KLRK1H3BQV0 150 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 KLK2P20151 261 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 EPHA8P29322 1005 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 HOXA6P31267 233 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 LIMS2Q7Z4I7 341 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 CPEB2Q7Z5Q1 589 aaKnown RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 MARCH3Q86UD3 253 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 RPS19BP1Q86WX3 136 aaKnown RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 MSRB3Q8IXL7 192 aa5.07□□□□□ -1.6
VCAN-201ENST00000265077 PSMG3Q9BT73 122 aaPredicted RBP5.07□□□□□ -1.6
VCAN-201ENST00000265077 MED19A0JLT2 244 aaPredicted RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 IGHA2P01877 340 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 Q56UQ5 140 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 WDR34Q96EX3 536 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 DIRC2Q96SL1 478 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 SMOC1Q9H4F8 434 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 RNF122Q9H9V4 155 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 DECR2Q9NUI1 292 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 DNPH1O43598 174 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 HES1Q14469 280 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 IGFBP7Q16270 282 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ZDHHC23Q8IYP9 409 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 FAM169BQ8N8A8 192 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 FGF17O60258 216 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ACTL6AO96019 429 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 VSIG10L2P0DP72 767 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 EMDP50402 254 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ZNF343Q6P1L6 599 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 PTPMT1Q8WUK0 201 aaPredicted RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 TMEM186Q96B77 213 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 CNRIP1Q96F85 164 aaPredicted RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 SIGLEC11Q96RL6 698 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 CALHM2Q9HA72 323 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 OCIAD1Q9NX40 245 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 MUC4Q99102 2169 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 DEDDO75618 318 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 MDKP21741 143 aaPredicted RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 C1orf194Q5T5A4 169 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ELSPBP1Q96BH3 223 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 GALMQ96C23 342 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 SNHG12Q9BXW3 62 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 TPSD1Q9BZJ3 242 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 SEC11BP0C7V7 166 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms