RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 FAM201AQ5SY85 155 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 CLEC18BQ6UXF7 455 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 OR10V1Q8NGI7 309 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 HS3ST6Q96QI5 342 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 IL36GQ9NZH8 169 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 BOD1L1Q8NFC6 3051 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 TMPRSS2O15393 492 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 NXPH3O95157 252 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 DUS4LO95620 317 aaKnown RBP7.92□□□□□ -1.14
SSR3-201ENST00000265044 SIGIRRQ6IA17 410 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 LGI3Q8N145 548 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 SLX1AQ9BQ83 275 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.92□□□□□ -1.14
SSR3-201ENST00000265044 RNF7Q9UBF6 113 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 MAB21L2Q9Y586 359 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 IGKV1D-8A0A087WSZ0 117 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A10PA6NDY2 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A18PA6NE21 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A16PA6NEW6 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A20PA6NIJ5 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 NKX6-3A6NJ46 265 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A8PA6NJQ4 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A7PA6NKC0 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A22PA8MWA6 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A12PA8MX19 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A5PA8MXJ8 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A23PA8MXZ1 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 TFF1P04155 84 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A15PP0C7V4 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A13PP0C7W8 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A14PP0C7W9 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 FAM90A24PP0C7X0 464 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 PRDX2P32119 198 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 CD80P33681 288 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 CAV2P51636 162 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 COL10A1Q03692 680 aa7.92□□□□□ -1.14
SSR3-201ENST00000265044 MRPL37Q9BZE1 423 aaKnown RBP7.92□□□□□ -1.14
SSR3-201ENST00000265044 CISD1Q9NZ45 108 aaKnown RBP7.92□□□□□ -1.14
SSR3-201ENST00000265044 HIVEP3Q5T1R4 2406 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 SFT2D2O95562 160 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 MDH2P40926 338 aaKnown RBP7.91□□□□□ -1.14
SSR3-201ENST00000265044 TMEM268Q5VZI3 342 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 FAM219AQ8IW50 185 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 PCNPQ8WW12 178 aaKnown RBP7.91□□□□□ -1.14
SSR3-201ENST00000265044 CYYR1Q96J86 154 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 GPHA2Q96T91 129 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 ALX4Q9H161 411 aaPredicted RBP7.91□□□□□ -1.14
SSR3-201ENST00000265044 TMEM165Q9HC07 324 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 GPR132Q9UNW8 380 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 PKD1L2Q7Z442 2459 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 CGAP01215 116 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 OR5AC1P0C628 307 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 ZBTB25P24278 435 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 ASCL1P50553 236 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 OPCMLQ14982 345 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 C6orf183Q5T699 404 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 LINC00596Q86U02 117 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 SLC38A6Q8IZM9 456 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 OR1S1Q8NH92 325 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 WFIKKN1Q96NZ8 548 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 SLC2A9Q9NRM0 540 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 WIPI2Q9Y4P8 454 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 LOC400499M0QZD8 3231 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 EPG5Q9HCE0 2579 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 ZSCAN5BA6NJL1 495 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 GPR31O00270 319 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 CYB5R3P00387 301 aaPredicted RBP7.91□□□□□ -1.14
SSR3-201ENST00000265044 PPP3CBP16298 524 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 PMELP40967 661 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 HTR2BP41595 481 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 LYPD6Q86Y78 171 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 SPICQ8N5J4 248 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 SPIN2AQ99865 258 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 SPIN2BQ9BPZ2 258 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 C5orf66Q9H5L9 145 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 CCL28Q9NRJ3 127 aa7.91□□□□□ -1.14
SSR3-201ENST00000265044 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.91□□□□□ -1.149e-7■■□□□ 12.9
SSR3-201ENST00000265044 MYO18BQ8IUG5 2567 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 NDUFA5Q16718 116 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 DCAF12L2Q5VW00 463 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 MOB1BQ7L9L4 216 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 GON7Q9BXV9 100 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 SMIM3Q9BZL3 60 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 RAB9BQ9NP90 201 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 RASL12Q9NYN1 266 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 TUBD1Q9UJT1 453 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 WDFY3Q8IZQ1 3526 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 WIPF3A6NGB9 483 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 MLNRO43193 412 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 CA11O75493 328 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 CTSDP07339 412 aaPredicted RBP7.9□□□□□ -1.14
SSR3-201ENST00000265044 PSMB6P28072 239 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 HLA-DRB3P79483 266 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 HOXA4Q00056 320 aaPredicted RBP7.9□□□□□ -1.14
SSR3-201ENST00000265044 C5orf24Q7Z6I8 188 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 GAPTQ8N292 157 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 ZNRF1Q8ND25 227 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 GTF3AQ92664 365 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms