RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 MMP24Q9Y5R2 645 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 CYB5R3P00387 301 aaPredicted RBP13.07□□□□□ -0.32
CCDC6-201ENST00000263102 CT62P0C5K7 136 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 WNT3P56703 355 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 ARF6P62330 175 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 INO80CQ6PI98 192 aaPredicted RBP13.07□□□□□ -0.32
CCDC6-201ENST00000263102 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 TMEM204Q9BSN7 226 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 PRNDQ9UKY0 176 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 A0A1B0GVG6 124 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 FAM157CP0CG43 387 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 PGA3P0DJD8 388 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 HCP5Q6MZN7 132 aa13.07□□□□□ -0.32
CCDC6-201ENST00000263102 BCL2L11O43521 198 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 GAPDHP04406 335 aaKnown RBP13.06□□□□□ -0.32
CCDC6-201ENST00000263102 RANP62826 216 aaKnown RBP13.06□□□□□ -0.32
CCDC6-201ENST00000263102 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 ZNF488Q96MN9 340 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 MAP1LC3CQ9BXW4 147 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 A0A1B0GUH1 482 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 PYCARD-AS1I3L0S3 204 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
CCDC6-201ENST00000263102 CD81P60033 236 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 TGIF1Q15583 401 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 CD226Q15762 336 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 OR2V2Q96R30 315 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 ELOVL1Q9BW60 279 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 DAOP14920 347 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 CBLN3Q6UW01 205 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 OR1K1Q8NGR3 316 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 DUSP15Q9H1R2 295 aaPredicted RBP13.06□□□□□ -0.32
CCDC6-201ENST00000263102 ZNF735P0CB33 412 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 NSUN5P1Q3KNT7 163 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 LRRC75AQ8NAA5 344 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 OR6X1Q8NH79 312 aa13.06□□□□□ -0.32
CCDC6-201ENST00000263102 GON4LQ3T8J9 2241 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 SYNGR1O43759 233 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 SP9P0CG40 484 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 PTBP1P26599 531 aaKnown RBP eCLIP13.05□□□□□ -0.327e-9■■■■■ 42.3
CCDC6-201ENST00000263102 KHDC3LQ587J8 217 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 OR1L8Q8NGR8 309 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 AKIRIN1Q9H9L7 192 aaPredicted RBP13.05□□□□□ -0.32
CCDC6-201ENST00000263102 PRDM6Q9NQX0 595 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 ANKRD12Q6UB98 2062 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 TMEM229AB2RXF0 380 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 GZMHP20718 246 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 SLC6A1P30531 599 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
CCDC6-201ENST00000263102 LSMEM1Q8N8F7 131 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 NTNG2Q96CW9 530 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 NKX2-2O95096 273 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 PRSS2P07478 247 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 CISD3P0C7P0 127 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 GCSAMLQ5JQS6 135 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 FOXC2Q99958 501 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 K7N7A8 449 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 SRSF10O75494 262 aaKnown RBP13.05□□□□□ -0.32
CCDC6-201ENST00000263102 PCOLCEQ15113 449 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 GLDNQ6ZMI3 551 aaPredicted RBP13.05□□□□□ -0.32
CCDC6-201ENST00000263102 LINC01555Q8NAE3 123 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 LOC105371242A0A075B767 164 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 POLR2GP62487 172 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC6-201ENST00000263102 ZNF56Q15929 161 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 CDCA4Q9BXL8 241 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 STARD10Q9Y365 291 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 RNF115Q9Y4L5 304 aa13.05□□□□□ -0.32
CCDC6-201ENST00000263102 CDRT15L2A8MXV6 281 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 TO15178 435 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 PRDX2P32119 198 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 CSF2RBP32927 897 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 RAB9AP51151 201 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 GUK1Q16774 197 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 SPRED3Q2MJR0 410 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 COL13A1Q5TAT6 717 aaPredicted RBP13.04□□□□□ -0.32
CCDC6-201ENST00000263102 LRP11Q86VZ4 500 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 C1orf162Q8NEQ5 155 aaPredicted RBP13.04□□□□□ -0.32
CCDC6-201ENST00000263102 GABARAPL3Q9BY60 117 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 TLNRD1Q9H1K6 362 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 PITPNC1Q9UKF7 332 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
CCDC6-201ENST00000263102 SFT2D2O95562 160 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 CST2P09228 141 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 NEU1Q99519 415 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 RAXQ9Y2V3 346 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 J3QR06 171 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 CTGFP29279 349 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 GAPTQ8N292 157 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 ITLN1Q8WWA0 313 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 TMEM189A5PLL7 270 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 NPFFO15130 113 aa13.04□□□□□ -0.32
CCDC6-201ENST00000263102 CELA2AP08217 269 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms