RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
CHCHD3-201ENST00000262570 ANK3Q12955 4377 aaKnown RBP13.68□□□□□ -0.22
CHCHD3-201ENST00000262570 A0A0A6YYH2 397 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 TMEM30CPA0ZSE6 113 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 MEX3AA1L020 520 aaKnown RBP13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 A6NJ64 397 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 MFNGO00587 321 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 AVPP01185 164 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 APOA1P02647 267 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 HIST1H1DP16402 221 aaKnown RBP13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 C1orf122Q6ZSJ8 110 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 C11orf42Q8N5U0 333 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 KIR3DL3Q8N743 410 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 ZNF565Q8N9K5 539 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 OR6C3Q9NZP0 311 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 UBE2J1Q9Y385 318 aaPredicted RBP13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 KPTNQ9Y664 436 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
CHCHD3-201ENST00000262570 A0A075B6Q4 140 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 TRGV10A0A0A0MS01 117 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 A0A1W2PPH5 198 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 M0R1W7 72 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 HPGDSO60760 199 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 ZNF728P0DKX0 622 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 MMP9P14780 707 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 GNB3P16520 340 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CCL3L1P16619 93 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CDK2P24941 298 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 DLX6P56179 175 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 ARL6IP1Q15041 203 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CR1LQ2VPA4 569 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CDNFQ49AH0 187 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 OLFML2AQ68BL7 652 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 Q8N7P7 452 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 OR13A1Q8NGR1 328 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 PHF21AQ96BD5 680 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 ZNF714Q96N38 554 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 NXF2Q9GZY0 626 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 SIRPDQ9H106 197 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 ZMAT3Q9HA38 289 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 DIABLOQ9NR28 239 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 BATF3Q9NR55 127 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 ONECUT1Q9UBC0 465 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 OPN4Q9UHM6 478 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 AK3Q9UIJ7 227 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 AUP1Q9Y679 476 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 MTORP42345 2549 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 SONP18583 2426 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 SERPINE3A8MV23 424 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CTDSP2O14595 271 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 NAPSAO96009 420 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CGB3P0DN86 165 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 CGB7P0DN87 165 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 METTL11BQ5VVY1 283 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 C1orf229Q6ZS94 237 aaPredicted RBP13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 TRAPPC6BQ86SZ2 158 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 OR4K15Q8NH41 348 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 MRPL30Q8TCC3 161 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 WDFY2Q96P53 400 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.66□□□□□ -0.226e-6■■■■□ 22.2
CHCHD3-201ENST00000262570 TMEM160Q9NX00 188 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 TAS2R3Q9NYW6 316 aa13.66□□□□□ -0.22
CHCHD3-201ENST00000262570 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 TRAV39A0A0B4J263 110 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 XRCC3O43542 346 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 ELK1P19419 428 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 ZNF260Q3ZCT1 412 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 Q71RC1 249 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 MRGPRDQ8TDS7 321 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 CCDC107Q8WV48 283 aa13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 RIMS4Q9H426 269 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-201ENST00000262570 KIAA2026Q5HYC2 2103 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 TRAV18A0A075B6X5 111 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 TOX4O94842 621 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 GSTP1P09211 210 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 GZMHP20718 246 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 GLP1RP43220 463 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 ERVFRD-1P60508 538 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 C17orf58Q2M2W7 97 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 Q6ZPA2 131 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 MCFD2Q8NI22 146 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 HDHD3Q9BSH5 251 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 MIXL1Q9H2W2 232 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 GAL3ST2Q9H3Q3 398 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 METTL8Q9H825 291 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 UNKLQ9H9P5 680 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 MBNL3Q9NUK0 354 aaKnown RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 ELF5Q9UKW6 265 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
CHCHD3-201ENST00000262570 TRBV6-6A0A0A6YYG2 114 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 KBTBD11-OT1A0A1B0GTJ5 212 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 hCG_1809904A0A1W2PP81 198 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 A0A1W2PPE2 198 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 A0A1W2PR64 198 aa13.63□□□□□ -0.23
CHCHD3-201ENST00000262570 A0A1W2PRV1 198 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms