RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HLA-DRB3P79483 266 aa15□□□□□ -0.01
TRAM1-201ENST00000262213 SLC23A3Q6PIS1 610 aa15□□□□□ -0.01
TRAM1-201ENST00000262213 TDHQ8IZJ6 230 aa15□□□□□ -0.01
TRAM1-201ENST00000262213 RNASE11Q8TAA1 199 aaKnown RBP15□□□□□ -0.01
TRAM1-201ENST00000262213 TMEM56Q96MV1 263 aa15□□□□□ -0.01
TRAM1-201ENST00000262213 WNT5BQ9H1J7 359 aa15□□□□□ -0.01
TRAM1-201ENST00000262213 TMEM56-RWDD3S4R434 201 aa15□□□□□ -0.01
TRAM1-201ENST00000262213 A0A087WZY1 265 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 SLC22A20A6NK97 555 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 ZNF732B4DXR9 585 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 CXCL13O43927 109 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 GAMTQ14353 236 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 TMEM42Q69YG0 159 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 WDR5BQ86VZ2 330 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 OR2H1Q9GZK4 316 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 VSIRQ9H7M9 311 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 ZNF665Q9H7R5 613 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 FAM86C1Q9NVL1 165 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 GFOD1Q9NXC2 390 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 PTRH2Q9Y3E5 179 aaKnown RBP14.99□□□□□ -0.01
TRAM1-201ENST00000262213 PI4KAP42356 2102 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 A0A0G2JMM0 328 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 A0A0G2JRQ6 117 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 A0A1W2PPB8 328 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 A0A1W2PRS3 328 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 KIR3DP1A8MWS1 328 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 SEC14L6B5MCN3 397 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 F10P00742 488 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 CST2P09228 141 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 EDN3P14138 238 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 HERPUD1Q15011 391 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 EXT1Q16394 746 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 PLPPR1Q8TBJ4 325 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 FAM210BQ96KR6 192 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 FOXB1Q99853 325 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 CRIM1Q9NZV1 1036 aa14.99□□□□□ -0.01
TRAM1-201ENST00000262213 CHD3Q12873 2000 aaKnown RBP14.99□□□□□ -0.01
TRAM1-201ENST00000262213 VPS13AQ96RL7 3174 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 FREM1Q5H8C1 2179 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 A0A087WWC5 75 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 ZNF816-ZNF321PA0A0X1KG74 233 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 OR6C6A6NF89 314 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 RPL36A-HNRNPH2H7BZ11 118 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 PLA2G5P39877 138 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 ZNF880Q6PDB4 577 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 FAM185AQ8N0U4 392 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 HIST3H2BBQ8N257 126 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 ABHD5Q8WTS1 349 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 ATP5SQ99766 215 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 SSX3Q99909 188 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 CACNA1EQ15878 2313 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 IAPPP10997 89 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 IGFBP4P22692 258 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 GPM6AP51674 278 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 CARD18P57730 90 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 ID3Q02535 119 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 NMSQ5H8A3 153 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 INTS12Q96CB8 462 aaKnown RBP14.98□□□□□ -0.01
TRAM1-201ENST00000262213 ARHGAP21Q5T5U3 1957 aa14.98□□□□□ -0.01
TRAM1-201ENST00000262213 SRFP11831 508 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 VDAC1P21796 283 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 SSR4P51571 173 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 RAC1P63000 192 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 OR8B8Q15620 311 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 MYPOPQ86VE0 399 aaPredicted RBP14.97□□□□□ -0.01
TRAM1-201ENST00000262213 SNX22Q96L94 193 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 PRDM13Q9H4Q3 707 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 TAAR3PQ9P1P4 343 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 FRYLO94915 3013 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 IFNA5P01569 189 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 PGA5P0DJD9 388 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 PAX9P55771 341 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 TAS2R30P59541 319 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 UNQ6494/PRO21346Q6UXR6 183 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 STX12Q86Y82 276 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 OR56B2PQ8NGI1 322 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 RBMXL1Q96E39 390 aaKnown RBP14.97□□□□□ -0.01
TRAM1-201ENST00000262213 OPA3Q9H6K4 179 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 Q9N2K0 584 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 KIAA1549Q9HCM3 1950 aa14.97□□□□□ -0.01
TRAM1-201ENST00000262213 FAM186AA6NE01 2351 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 LOC102723971A0A1B0GUV8 181 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 TRAPPC6AO75865 159 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 HBE1P02100 147 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 SLC35E3Q7Z769 313 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 OR8G5Q8NG78 346 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 MEGF10Q96KG7 1140 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 IL36GQ9NZH8 169 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 LRFN1Q9P244 771 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 FREM2Q5SZK8 3169 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 IGKV1-6A0A0C4DH72 117 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 MMP9P14780 707 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 ZNF787Q6DD87 383 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 MRPL14Q6P1L8 145 aaKnown RBP14.96□□□□□ -0.01
TRAM1-201ENST00000262213 SIRT7Q9NRC8 400 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 PLSCR2Q9NRY7 297 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 RPRMQ9NS64 109 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 DOCK7Q96N67 2140 aa14.96□□□□□ -0.01
TRAM1-201ENST00000262213 C1orf87Q8N0U7 546 aa14.96□□□□□ -0.02
TRAM1-201ENST00000262213 CPEB3Q8NE35 698 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms