RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FAM90A14PP0C7W9 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAM90A24PP0C7X0 464 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 GABRR1P24046 479 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 RBM11P57052 281 aaKnown RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 KLF3P57682 345 aaPredicted RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 IL24Q13007 206 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 RBMS2Q15434 407 aaKnown RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 MSMPQ1L6U9 139 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 NHLRC3Q5JS37 347 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 DCAF12L2Q5VW00 463 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 FAAP20Q6NZ36 180 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 OR8S1Q8NH09 359 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 ZNF486Q96H40 463 aaPredicted RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 HYLS1Q96M11 299 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 RANBP3Q9H6Z4 567 aaPredicted RBP11.09□□□□□ -0.63
SGCA-201ENST00000262018 IFT46Q9NQC8 304 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 DUSP13Q9UII6 198 aa11.09□□□□□ -0.63
SGCA-201ENST00000262018 A0A1B0GWJ7 208 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 TMEM210A6NLX4 147 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 SNRPGP15A8MWD9 76 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 TRAPPC2LH3BP13 241 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 J3QLI3 93 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 J3QT63 122 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 SYNGR1O43759 233 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 NDUFB6O95139 128 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 RAB3DO95716 219 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 HPXP02790 462 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 IL5P05113 134 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 BCL3P20749 454 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 CHATP28329 748 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 NPBWR2P48146 333 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 FGF12P61328 243 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 MRPS15P82914 257 aaKnown RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 BAMBIQ13145 260 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 TAF9Q16594 264 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 HAGHLQ6PII5 290 aaPredicted RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 ZNF782Q6ZMW2 699 aaPredicted RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 WDR86Q86TI4 376 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 NOXA1Q86UR1 476 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 OR4D10Q8NGI6 311 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 RDH5Q92781 318 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 SLAMF9Q96A28 289 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 SYT3Q9BQG1 590 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 SLC25A21Q9BQT8 299 aaPredicted RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 ADAT1Q9BUB4 502 aaKnown RBP11.08□□□□□ -0.64
SGCA-201ENST00000262018 C20orf85Q9H1P6 137 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 GHITMQ9H3K2 345 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 RHOFQ9HBH0 211 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 MTCH1Q9NZJ7 389 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 FZR1Q9UM11 496 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 ST3GAL6Q9Y274 331 aa11.08□□□□□ -0.64
SGCA-201ENST00000262018 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 M0QZ24 198 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 GEMIN2O14893 280 aaKnown RBP11.07□□□□□ -0.64
SGCA-201ENST00000262018 IGHV3-13P01766 116 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 FCER2P06734 321 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 ZNF735P0CB33 412 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 ANXA3P12429 323 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 OMGP23515 440 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 PMELP40967 661 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 TMEM33P57088 247 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 MEF2DQ14814 521 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 OR8G1Q15617 311 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 KCNJ8Q15842 424 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 C6orf201Q7Z4U5 140 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 CYYR1Q96J86 154 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 TINAGL1Q9GZM7 467 aaPredicted RBP11.07□□□□□ -0.64
SGCA-201ENST00000262018 ALX4Q9H161 411 aaPredicted RBP11.07□□□□□ -0.64
SGCA-201ENST00000262018 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 ZNF665Q9H7R5 613 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 PLEKHJ1Q9NW61 149 aa11.07□□□□□ -0.64
SGCA-201ENST00000262018 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.06□□□□□ -0.64
SGCA-201ENST00000262018 M0R233 179 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 MLNRO43193 412 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 TPD52L2O43399 206 aaKnown RBP11.06□□□□□ -0.64
SGCA-201ENST00000262018 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
SGCA-201ENST00000262018 PDCD6O75340 191 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 FSHBP01225 129 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 RNASE1P07998 156 aaKnown RBP11.06□□□□□ -0.64
SGCA-201ENST00000262018 C4BPBP20851 252 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 NKPD1Q17RQ9 610 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 C17orf107Q6ZR85 190 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 HOGA1Q86XE5 327 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 SPERTQ8NA61 448 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 OR4S1Q8NGB4 309 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 OR10AD1Q8NGE0 317 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 OR51S1Q8NGJ8 323 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 GRPEL2Q8TAA5 225 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 CCDC107Q8WV48 283 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
SGCA-201ENST00000262018 EMG1Q92979 244 aaKnown RBP11.06□□□□□ -0.64
SGCA-201ENST00000262018 GON7Q9BXV9 100 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms