RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 RPS18P62269 152 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 SRPXP78539 464 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 RAB35Q15286 201 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 TAF9Q16594 264 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 SP6Q3SY56 376 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 ABLIM2Q6H8Q1 611 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 ZIC4Q8N9L1 334 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 CCDC71LQ8N9Z2 235 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 CPT1CQ8TCG5 803 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 HAS2Q92819 552 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 UCN2Q96RP3 112 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 RBM24Q9BX46 236 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 CTDSP1Q9GZU7 261 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 CDH20Q9HBT6 801 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF391Q9UJN7 358 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 V9GYS6 101 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 KIAA1549Q9HCM3 1950 aa9.33□□□□□ -0.92
CHRNA1-201ENST00000261007 LRRC3CA6NJW4 275 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 STMND1H3BQB6 276 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 DHRS3O75911 302 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 CYB5R3P00387 301 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 GCGP01275 180 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM225BP0DP42 221 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 CD59P13987 128 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 MMP9P14780 707 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 NOVA1P51513 510 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 HNF4GQ14541 408 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 C6orf201Q7Z4U5 140 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 GGNQ86UU5 652 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 ZFP62Q8NB50 900 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 Q96M66 194 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 FAM173AQ9BQD7 235 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 SRXN1Q9BYN0 137 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 LIME1Q9H400 295 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 DNAH14Q0VDD8 3507 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 IGHV3-15A0A0B4J1V0 119 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 LOC102723971A0A1B0GUV8 181 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 MED19A0JLT2 244 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF850A8MQ14 1090 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 C9orf172C9J069 976 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 M0R135 149 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 OPN1MWP04001 364 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 OPN1MW2P0DN77 364 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 OPN1MW3P0DN78 364 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 PCBD1P61457 104 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 RPL23AP62750 156 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 BAXQ07812 192 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 NRN1LQ496H8 165 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 ABHD17BQ5VST6 288 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 AAED1Q7RTV5 226 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 YRDCQ86U90 279 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF799Q96GE5 643 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 ADGRG7Q96K78 797 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 RBM14Q96PK6 669 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 SPIN2AQ99865 258 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 SPIN2BQ9BPZ2 258 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 MRPL37Q9BZE1 423 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 SLC2A9Q9NRM0 540 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 LYRM2Q9NU23 88 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 PLEK2Q9NYT0 353 aa9.32□□□□□ -0.92
CHRNA1-201ENST00000261007 PHF3Q92576 2039 aaKnown RBP9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 A0A1B0GU03 582 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 IGSF23A1L1A6 192 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 FAM24AA6NFZ4 105 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 MT-CO3P00414 261 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 DBHP09172 617 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 GZMBP10144 247 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 FCGR2AP12318 317 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 GABRR1P24046 479 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 GDF1P27539 372 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 CD200P41217 278 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 RELQ04864 619 aaPredicted RBP9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 PHYHD1Q5SRE7 291 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 TGIF2LXQ8IUE1 241 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 FAM185AQ8N0U4 392 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 PSMF1Q92530 271 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 TOMM40LQ969M1 308 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM45BQ96B21 275 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 THOC3Q96J01 351 aaKnown RBP9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 LRFN1Q9P244 771 aa9.31□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF716A6NP11 495 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 TRDCB7Z8K6 153 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 MSTNO14793 375 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 GEMIN2O14893 280 aaKnown RBP9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 CYTIPO60759 359 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 TRAPPC6AO75865 159 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 CEBPGP53567 150 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 MTCP1P56278 107 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM252Q8N6L7 170 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 OR5D18Q8NGL1 313 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 OR10D3Q8NH80 312 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 MOB3AQ96BX8 217 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 SRD5A3Q9H8P0 318 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM38BQ9NVV0 291 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms