RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 KIF25Q9UIL4 384 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
CCDC90B-201ENST00000260054 ABCA2Q9BZC7 2435 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 TRAV39A0A0B4J263 110 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 TMEM30CPA0ZSE6 113 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 A8MXK9 166 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 C22orf46C9J442 243 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 SSX5O60225 188 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 CA11O75493 328 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 NAPSAO96009 420 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 MT-ND4P03905 459 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 ARFRP1Q13795 201 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF79Q15937 498 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 PNLIPRP3Q17RR3 467 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 SPANXN2Q5MJ10 180 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 BAIAP2L2Q6UXY1 529 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 BTN2A1Q7KYR7 527 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 TCF23Q7RTU1 214 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 OR4K15Q8NH41 348 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 C12orf4Q9NQ89 552 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 C19orf12Q9NSK7 152 aa13.07□□□□□ -0.32
CCDC90B-201ENST00000260054 CREBBPQ92793 2442 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 MEIKINA0A087WXM9 373 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 ODAMA1E959 279 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 MEIOCA2RUB1 952 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 GPR37O15354 613 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 TPPPO94811 219 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 HEXAP06865 529 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 CD3GP09693 182 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 GNG2P59768 71 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 RPL31P62899 125 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 LCN2P80188 198 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 PYHIN1Q6K0P9 492 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 CIARTQ8N365 385 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 MFSD4AQ8N468 514 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 ARHGAP32A7KAX9 2087 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 OTOGQ6ZRI0 2925 aa13.06□□□□□ -0.32
CCDC90B-201ENST00000260054 MRPS15P82914 257 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 OR13A1Q8NGR1 328 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 CCDC107Q8WV48 283 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 LPAR2Q9HBW0 351 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 RPUSD1Q9UJJ7 312 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF469Q96JG9 3925 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 CR1P17927 2039 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 LOC105371242A0A075B767 164 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 MEIS3P1A6NDR6 274 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 FCGR3AP08637 254 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 RCC1P18754 421 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 PRSS3P35030 304 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 PITPNAQ00169 270 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF273Q14593 569 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 RNASE12Q5GAN4 147 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 NEURL2Q9BR09 285 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 NCOR1P1Q9H4R4 102 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF230Q9UIE0 474 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 TRAPPC2LQ9UL33 140 aa13.05□□□□□ -0.32
CCDC90B-201ENST00000260054 DSCAML1Q8TD84 2053 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 TRBV23-1A0A0A0MS06 115 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 TRBV6-6A0A0A6YYG2 114 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 H7C1Q1 480 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 FOXH1O75593 365 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 PAX2Q02962 417 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 MEF2CQ06413 473 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 TMEM200BQ69YZ2 307 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF880Q6PDB4 577 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 TRAPPC6BQ86SZ2 158 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 FAM185AQ8N0U4 392 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 GVQW1Q8N7I0 195 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 C8orf46Q8TAG6 207 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 MRGPRDQ8TDS7 321 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 GPX8Q8TED1 209 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 C15orf40Q8WUR7 153 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 DACT3Q96B18 629 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 SRRQ9GZT4 340 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 MBNL3Q9NUK0 354 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 RABL2AQ9UBK7 228 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 RABL2BQ9UNT1 228 aa13.04□□□□□ -0.32
CCDC90B-201ENST00000260054 hADV38S2A0JD32 116 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 CTDSPLO15194 276 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 LPLP06858 475 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 GLP1RP43220 463 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 DGCR2P98153 550 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 ZNF45Q02386 682 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 TMEM249Q2WGJ8 235 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 CD276Q5ZPR3 534 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 C5orf24Q7Z6I8 188 aa13.03□□□□□ -0.32
CCDC90B-201ENST00000260054 LY6G5BQ8NDX9 201 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms