RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DIRAS3O95661 229 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 CD200P41217 278 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 KLF3P57682 345 aaPredicted RBP23.37■■□□□ 1.33
CCM2-201ENST00000258781 PRAMEF6Q5VXH4 476 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 SSX8Q7RTT4 187 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 SLC7A5P1Q8MH63 180 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 GAPTQ8N292 157 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 GLS2Q9UI32 602 aa23.37■■□□□ 1.33
CCM2-201ENST00000258781 MPC2O95563 127 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 S100A11P31949 105 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 HERPUD1Q15011 391 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 C11orf87Q6NUJ2 197 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 C20orf204Q6ZNR8 217 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 ZNF826PQ6ZT77 177 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 OR4A4PQ8NGN8 299 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 NAA60Q9H7X0 242 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 RASL12Q9NYN1 266 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 C13orf42A0A1B0GVH6 325 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 HAND1O96004 215 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 HLA-DRB3P79483 266 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 ZNF497Q6ZNH5 498 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 C22orf34Q6ZV56 151 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 TMUB2Q71RG4 321 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 LRP11Q86VZ4 500 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 ZNF680Q8NEM1 530 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 OR5T2Q8NGG2 359 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 TMEM171Q8WVE6 324 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 GALNT14Q96FL9 552 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 PRR13Q9NZ81 148 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 DUSP13Q9UII6 198 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 KCNIP3Q9Y2W7 256 aa23.36■■□□□ 1.33
CCM2-201ENST00000258781 IGLV3-9A0A075B6K5 115 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 ATP6V1G2-DDX39BF2Z307 99 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 TUSC2O75896 110 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 PTBP3O95758 552 aaKnown RBP23.35■■□□□ 1.33
CCM2-201ENST00000258781 CD40P25942 277 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 CCDC71LQ8N9Z2 235 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 RTN4IP1Q8WWV3 396 aaPredicted RBP23.35■■□□□ 1.33
CCM2-201ENST00000258781 SYT3Q9BQG1 590 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 SLC2A9Q9NRM0 540 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 PCDHB10Q9UN67 800 aa23.35■■□□□ 1.33
CCM2-201ENST00000258781 BET1O15155 118 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 ADAP1O75689 374 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 LMO1P25800 156 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 ADORA2A-AS1P86434 159 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 ACP7Q6ZNF0 438 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 ZNF546Q86UE3 836 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 OR2Z1Q8NG97 314 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 MFFQ9GZY8 342 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 IGKV1-6A0A0C4DH72 117 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 FAM185AQ8N0U4 392 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 PRR7Q8TB68 274 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 PLPPR1Q8TBJ4 325 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 BBC3Q96PG8 261 aaPredicted RBP23.34■■□□□ 1.33
CCM2-201ENST00000258781 VRK1Q99986 396 aaPredicted RBP23.34■■□□□ 1.33
CCM2-201ENST00000258781 CABLES2Q9BTV7 478 aa23.34■■□□□ 1.33
CCM2-201ENST00000258781 METTL8Q9H825 291 aaKnown RBP23.34■■□□□ 1.33
CCM2-201ENST00000258781 LILRB4Q8NHJ6 448 aa23.33■■□□□ 1.33
CCM2-201ENST00000258781 SUCNR1Q9BXA5 334 aa23.33■■□□□ 1.33
CCM2-201ENST00000258781 UFSP2Q9NUQ7 469 aa23.33■■□□□ 1.33
CCM2-201ENST00000258781 RDH8Q9NYR8 311 aa23.33■■□□□ 1.33
CCM2-201ENST00000258781 CADP27708 2225 aa23.33■■□□□ 1.32
CCM2-201ENST00000258781 WNT9BO14905 357 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 IFNA7P01567 189 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 PSMB6P28072 239 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 UQCRFS1P47985 274 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 LRRC37A5PQ49AS3 106 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 OR10Z1Q8NGY1 313 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 THAP6Q8TBB0 222 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 TNFSF18Q9UNG2 199 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 ZSCAN5BA6NJL1 495 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 RCC1P18754 421 aaPredicted RBP23.32■■□□□ 1.32
CCM2-201ENST00000258781 HTR2BP41595 481 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 SMIM21Q3B7S5 101 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 PHLDA2Q53GA4 152 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 TMEM108Q6UXF1 575 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 NUP37Q8NFH4 326 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 C2orf50Q96LR7 162 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 ARL6Q9H0F7 186 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 OR14J1Q9UGF5 321 aa23.32■■□□□ 1.32
CCM2-201ENST00000258781 CHD3Q12873 2000 aaKnown RBP23.31■■□□□ 1.32
CCM2-201ENST00000258781 KCNJ3P48549 501 aa23.31■■□□□ 1.32
CCM2-201ENST00000258781 ZNF345Q14585 488 aa23.31■■□□□ 1.32
CCM2-201ENST00000258781 TMEM187Q14656 261 aa23.31■■□□□ 1.32
CCM2-201ENST00000258781 C5orf24Q7Z6I8 188 aa23.31■■□□□ 1.32
CCM2-201ENST00000258781 TAAR3PQ9P1P4 343 aa23.31■■□□□ 1.32
CCM2-201ENST00000258781 TRBV6-7A0A0A0MS04 114 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 A0A0D9SG52 128 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 hCG_1807616A0A1W2PRN6 198 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 NPIPB11E5RHQ5 1161 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 PTAFRP25105 342 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 SELENOVP59797 346 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 RND3P61587 244 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 TLE1Q04724 770 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 VHLLQ6RSH7 139 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 WIPI2Q9Y4P8 454 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 IFNL4K9M1U5 179 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 CFHR2P36980 270 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 CDSNQ15517 529 aa23.3■■□□□ 1.32
CCM2-201ENST00000258781 LRTM2Q8N967 370 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms