RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 VN1R1Q9GZP7 353 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 SPHK2Q9NRA0 654 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 EMC9Q9Y3B6 208 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 LOC107984156A0A0G2JMH3 177 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 ZCWPW2A0A1B0GU75 182 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 ONECUT2O95948 504 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 ARL17AQ8IVW1 177 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 C1orf174Q8IYL3 243 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 TNS1Q9HBL0 1735 aaKnown RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 TRBV24-1A0A075B6N3 115 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 TRAV8-2A0A0B4J237 113 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 UPK3BL1B0FP48 263 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 UPK3BL2E5RIL1 263 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 HBZP02008 142 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 PDLIM4P50479 330 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 H2BFSP57053 126 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 PSG9Q00887 426 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 MRPL58Q14197 206 aaKnown RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 TCF24Q7RTU0 167 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 OR51E1Q8TCB6 317 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 CLDN23Q96B33 292 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 EAF1Q96JC9 268 aaPredicted RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 P2RX4Q99571 388 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 DUSP23Q9BVJ7 150 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR35Q9HC97 309 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 MRPS17Q9Y2R5 130 aaKnown RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 SFT2D2O95562 160 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 MPIG6BO95866 241 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 LINC00869P0C866 280 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 KIR2DL2P43627 348 aaPredicted RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 P2RY6Q15077 328 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 PDLIM3Q53GG5 364 aaPredicted RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 PHF19Q5T6S3 580 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 SAMD5Q5TGI4 173 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 TPRG1Q6ZUI0 275 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 CA13Q8N1Q1 262 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 STPG4Q8N801 248 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 IRF7Q92985 503 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 MYEOVQ96EZ4 313 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 STRADBQ9C0K7 418 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 SIGLEC7Q9Y286 467 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 A0A1W2PR48 441 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 SYNGR1O43759 233 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 CD8AP01732 235 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 CELA3AP09093 270 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 GLRXP35754 106 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 HTR6P50406 440 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 STC1P52823 247 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 ZNF77Q15935 545 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 PWWP2BQ6NUJ5 590 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 CDPF1Q6NVV7 123 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 SCD5Q86SK9 330 aa5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
PDGFRA-201ENST00000257290 TRBV9A0A0B4J1U6 114 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 KIR2DL5BA0A0G2JN68 375 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 KIR2DL5BA0A0G2JPC4 375 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 J3KTA2 159 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 GYPAP02724 150 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 VSIG10L2P0DP72 767 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 COX5AP20674 150 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 COLCA1Q6ZS62 124 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 CLECL1Q8IZS7 167 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 KIR2DL5AQ8N109 375 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 C17orf47Q8NEP4 570 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 INSM2Q96T92 566 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC17A5Q9NRA2 495 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 BOKQ9UMX3 212 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 LOXHD1Q8IVV2 1947 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 MED19A0JLT2 244 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 OR2T8A6NH00 312 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 G3V4G9 280 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 M0QXV9 152 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 CEACAM5P06731 702 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 ZNF728P0DKX0 622 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 BCL2P10415 239 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 ADCYAP1P18509 176 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 CSN1S1P47710 185 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 SOX8P57073 446 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 KLHDC8AQ8IYD2 350 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 SGMS2Q8NHU3 365 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 ZMYND19Q96E35 227 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 TRAV36DV7A0A075B6V5 113 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 TRAV5A0A0B4J249 113 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 A0A0D9SEW6 157 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 F5H768 121 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 CEACAM4O75871 244 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 ARSAP15289 507 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 ID4P47928 161 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 CENPVQ7Z7K6 275 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 EGLN3Q9H6Z9 239 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 WNT16Q9UBV4 365 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 CD160O95971 181 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 IL4P05112 153 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 ATP6V0CP27449 155 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 GNG5P63218 68 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 OR52E2Q8NGJ4 325 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 WDYHV1Q96HA8 205 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 TEX37Q96LM6 180 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 GRIFINA4D1Z8 144 aa5.95□□□□□ -1.46
PDGFRA-201ENST00000257290 APCSP02743 223 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms