RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 NAA60Q9H7X0 242 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 UQCC1Q9NVA1 299 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 CTDSPLO15194 276 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 IGFBP1P08833 259 aaPredicted RBP11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 PATE4P0C8F1 98 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 SPP1P10451 314 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 AKR1C3P42330 323 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 TAF9BQ9HBM6 251 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 IGHV2OR16-5A0A0B4J2B6 119 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 OR52I2Q8NH67 350 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 NRG4Q8WWG1 115 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 ZNF436Q9C0F3 470 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 AVPI1Q5T686 147 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 SP5Q6BEB4 398 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 CCL13Q99616 98 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 G6PC2Q9NQR9 355 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 ZIC3O60481 467 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 ZFPL1O95159 310 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 TMEM190Q8WZ59 177 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 ING1Q9UK53 422 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 MIA3Q5JRA6 1907 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 TGFAP01135 160 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 FABP5Q01469 135 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 HABP2Q14520 560 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 C9orf106Q8NAJ2 232 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 Q9N2K0 584 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 SLC6A13Q9NSD5 602 aa11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 SIRT4Q9Y6E7 314 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-201ENST00000257181 C20orf202A1L168 122 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 NEURL1O76050 574 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 AARDQ4LEZ3 155 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 DBX2Q6ZNG2 339 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 NUDCD2Q8WVJ2 157 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ARHGAP5-AS1Q96IT6 56 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 CXorf58Q96LI9 332 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 FBXL17Q9UF56 701 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 PRSS23O95084 383 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ZIC4Q8N9L1 334 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 CHAC2Q8WUX2 184 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 MAFIPQ8WZ33 124 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ZDHHC11Q9H8X9 412 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ZMAT3Q9HA38 289 aaKnown RBP11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SMCO4Q9NRQ5 59 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SIP14410 1827 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 CDC42EP2O14613 210 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 OIP5O43482 229 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 AKR1D1P51857 326 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 RAG2P55895 527 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ATP5G2Q06055 141 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SLC35E4Q6ICL7 350 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 H3F3CQ6NXT2 135 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 LAX1Q8IWV1 398 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 FLVCR1-AS1Q8TAF5 88 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ISG20L2Q9H9L3 353 aaKnown RBP11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 ANXA10Q9UJ72 324 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 GOLGA4Q13439 2230 aaKnown RBP11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 RPL27AP46776 148 aaKnown RBP11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 RHOBP62745 196 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 S100A12P80511 92 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SH2D2AQ9NP31 389 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 PDE4DIPQ5VU43 2346 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 WISP1O95388 367 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 PPP1CCP36873 323 aaKnown RBP11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 EXOSC2Q13868 293 aaKnown RBP11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SPCS2Q15005 226 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 OR4A47Q6IF82 309 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 SPACA5Q96QH8 159 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 WNT5BQ9H1J7 359 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
PRPF38A-201ENST00000257181 J3QLI3 93 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 P2RX3P56373 397 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 LOXL3P58215 753 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 FAM27E3Q08E93 113 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 OR4A5Q8NH83 315 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 RPUSD4Q96CM3 377 aaKnown RBP11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 ACY3Q96HD9 319 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 CITED4Q96RK1 184 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 C20orf24Q9BUV8 137 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 FNDC1Q4ZHG4 1894 aaPredicted RBP11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 RNASEK-C17orf49H0YIS7 233 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 TSPOP30536 169 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 RPS19P39019 145 aaKnown RBP11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 LIMS1P48059 325 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 SUN5Q8TC36 379 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 METTL26Q96S19 204 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 C7orf69Q9H7B7 122 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 HSF4Q9ULV5 492 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 NUP205Q92621 2012 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 RLFQ13129 1914 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
PRPF38A-201ENST00000257181 TGOLN2O43493 480 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms