RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 FAM230AA0A1W2PPH8 454 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 MAS1LP35410 378 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 CARD18P57730 90 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 FOXC1Q12948 553 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 C3AR1Q16581 482 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 OR10D3Q8NH80 312 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 CBY1Q9Y3M2 126 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 DHHO43323 396 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 IFNA17P01571 189 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 FKBP2P26885 142 aaKnown RBP14.62□□□□□ -0.07
FOXA1-201ENST00000250448 SUMF2Q8NBJ7 301 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 OR11L1Q8NGX0 322 aa14.62□□□□□ -0.07
FOXA1-201ENST00000250448 RBM24Q9BX46 236 aaKnown RBP14.62□□□□□ -0.07
FOXA1-201ENST00000250448 IGKV1-27A0A075B6S5 117 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 OR2C1O95371 312 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 GFRA1P56159 465 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 EWSR1Q01844 656 aaKnown RBP eCLIP14.61□□□□□ -0.07
FOXA1-201ENST00000250448 SOHLH1Q5JUK2 328 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 C1QL4Q86Z23 238 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 OR2AE1Q8NHA4 323 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 YPEL4Q96NS1 127 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 PUS1Q9Y606 427 aaKnown RBP eCLIP14.61□□□□□ -0.07
FOXA1-201ENST00000250448 SVILO95425 2214 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 FAM221AA4D161 298 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 NPIPA2E9PIF3 369 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 NPIPA3F8WFD2 350 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 PHF1O43189 567 aaPredicted RBP14.61□□□□□ -0.07
FOXA1-201ENST00000250448 PPIHO43447 177 aaKnown RBP14.61□□□□□ -0.07
FOXA1-201ENST00000250448 OR4D5Q8NGN0 318 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 MOB3AQ96BX8 217 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 BOD1Q96IK1 185 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 SYT3Q9BQG1 590 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 TMPRSS5Q9H3S3 457 aa14.61□□□□□ -0.07
FOXA1-201ENST00000250448 ZNHIT1O43257 154 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 RAC2P15153 192 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 ASCL1P50553 236 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 GNMTQ14749 295 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 CNN3Q15417 329 aaKnown RBP14.6□□□□□ -0.07
FOXA1-201ENST00000250448 RNFT1Q5M7Z0 435 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 TMEM123Q8N131 208 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 DEFB127Q9H1M4 99 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 ZNF286AQ9HBT8 521 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 TMED3Q9Y3Q3 217 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 LIPGQ9Y5X9 500 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 NTF4P34130 210 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 RTP5Q14D33 572 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 NCMAPQ5T1S8 102 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 BRICD5Q6PL45 260 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 HEPN1Q6WQI6 88 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 CCDC71LQ8N9Z2 235 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 RARRES2Q99969 163 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 SMDT1Q9H4I9 107 aa14.6□□□□□ -0.07
FOXA1-201ENST00000250448 TNRC6AQ8NDV7 1962 aaKnown RBP14.6□□□□□ -0.07
FOXA1-201ENST00000250448 IGHV2-70P01814 119 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 UCP3P55916 312 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 ZNF766Q5HY98 468 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 IGF2-ASQ6U949 168 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 SLC35G3Q8N808 338 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 ZIC4Q8N9L1 334 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 OR10AD1Q8NGE0 317 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 EDARADDQ8WWZ3 215 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 B4GALT7Q9UBV7 327 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 GEMIN2O14893 280 aaKnown RBP14.59□□□□□ -0.07
FOXA1-201ENST00000250448 KLK10O43240 276 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 GFRA3O60609 400 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 PIGYQ3MUY2 71 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 MEX3BQ6ZN04 569 aaKnown RBP14.59□□□□□ -0.07
FOXA1-201ENST00000250448 OR2V1Q8NHB1 315 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 SNIP1Q8TAD8 396 aaKnown RBP14.59□□□□□ -0.07
FOXA1-201ENST00000250448 ABHD3Q8WU67 409 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 KCNE4Q8WWG9 221 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 ADGRG7Q96K78 797 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 ULBP2Q9BZM5 246 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 PIEZO2Q9H5I5 2752 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 A0A1B0GV90 55 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 GJE1A6NN92 205 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 GPR37O15354 613 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 WISP2O76076 250 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 CD46P15529 392 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 RAC3P60763 192 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 HERV-K104P61576 105 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 OR2C3Q8N628 320 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 AKR7LQ8NHP1 331 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 ZNF837Q96EG3 531 aaPredicted RBP14.59□□□□□ -0.07
FOXA1-201ENST00000250448 BORCS8Q96FH0 119 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 C11orf1Q9H5F2 150 aa14.59□□□□□ -0.07
FOXA1-201ENST00000250448 KLF13Q9Y2Y9 288 aaPredicted RBP14.59□□□□□ -0.07
FOXA1-201ENST00000250448 FAM24AA6NFZ4 105 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 CRYGSP22914 178 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 ASCL4Q6XD76 172 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 LHFPL2Q6ZUX7 228 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 OR2G3Q8NGZ4 309 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 MUCL1Q96DR8 90 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 TP53RKQ96S44 253 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 BCO1Q9HAY6 547 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 FREM1Q5H8C1 2179 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 AADACP22760 399 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 ATP6V0CP27449 155 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 RBP2P50120 134 aa14.58□□□□□ -0.08
FOXA1-201ENST00000250448 PRSS12P56730 875 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms