RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PLEKHN1Q494U1 663 aaPredicted RBP13.49□□□□□ -0.25
LRFN1-201ENST00000248668 SSX3Q99909 188 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 MEMO1Q9Y316 297 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 ANKRD30BLA7E2S9 258 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 GPR37O15354 613 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 NDUFB7P17568 137 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 RAB5BP61020 215 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
LRFN1-201ENST00000248668 HABP2Q14520 560 aaPredicted RBP13.49□□□□□ -0.25
LRFN1-201ENST00000248668 MKXQ8IYA7 352 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 TRIB1Q96RU8 372 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 C1orf196B1AJZ1 125 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 SMIM6P0DI80 62 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 TNFSF10P50591 281 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 PRR18Q8N4B5 295 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 SUMF1Q8NBK3 374 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 TMEM178AQ8NBL3 297 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 ZFP57Q9NU63 452 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 TNFSF12O43508 249 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 NXPH3O95157 252 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 PPYP01298 95 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 NQO2P16083 231 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 TMEM187Q14656 261 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 ALKBH6Q3KRA9 238 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
LRFN1-201ENST00000248668 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 TP53RKQ96S44 253 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 CNTNAP3Q9BZ76 1288 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 ZNF292O60281 2723 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 GPX4P36969 197 aaPredicted RBP13.48□□□□□ -0.25
LRFN1-201ENST00000248668 IL15RAQ13261 267 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 OR52M1Q8NGK5 317 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 BCL2L2Q92843 193 aaPredicted RBP13.48□□□□□ -0.25
LRFN1-201ENST00000248668 TECTBQ96PL2 329 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 OR51M1Q9H341 326 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 FAM96BQ9Y3D0 163 aa13.48□□□□□ -0.25
LRFN1-201ENST00000248668 AKAP13Q12802 2813 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 K7EPK0 472 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 IGHV2-70P01814 119 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 PET100P0DJ07 73 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 HKR1P10072 659 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 RPL12P30050 165 aaKnown RBP13.47□□□□□ -0.25
LRFN1-201ENST00000248668 ASCL1P50553 236 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 FGF12P61328 243 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 BEND4Q6ZU67 534 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 FAM71E2Q8N5Q1 922 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 FAM117AQ9C073 453 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 SLC5A7Q9GZV3 580 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
LRFN1-201ENST00000248668 INTS1Q8N201 2190 aaKnown RBP13.47□□□□□ -0.25
LRFN1-201ENST00000248668 HSD17B6O14756 317 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 ZNF14P17017 642 aaPredicted RBP13.47□□□□□ -0.25
LRFN1-201ENST00000248668 ECI1P42126 302 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 PCP4P48539 62 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 EIF2S3LQ2VIR3 472 aaKnown RBP13.47□□□□□ -0.25
LRFN1-201ENST00000248668 C20orf204Q6ZNR8 217 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 OR2J1Q9GZK6 312 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 HRH4Q9H3N8 390 aa13.47□□□□□ -0.25
LRFN1-201ENST00000248668 AGPAT2O15120 278 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 DHRS7BQ6IAN0 325 aaPredicted RBP13.46□□□□□ -0.25
LRFN1-201ENST00000248668 TMEM211Q6ICI0 200 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 DPPA2Q7Z7J5 298 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 PHYHIPLQ96FC7 376 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 MBPP02686 304 aaPredicted RBP13.46□□□□□ -0.25
LRFN1-201ENST00000248668 ZNF44P15621 663 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 IL1F10Q8WWZ1 152 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 OR5P3Q8WZ94 311 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 LURAP1Q96LR2 239 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 AQP10Q96PS8 301 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 DECR2Q9NUI1 292 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 FBXL17Q9UF56 701 aa13.46□□□□□ -0.25
LRFN1-201ENST00000248668 IGKV1D-13A0A0B4J2D9 117 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 AGFG2O95081 481 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 CST4P01036 141 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 IGKV1-13P0DP09 117 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 COX5BP10606 129 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 ID4P47928 161 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 HERPUD1Q15011 391 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 ERGIC1Q969X5 290 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.26
LRFN1-201ENST00000248668 NCMAPQ5T1S8 102 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 TMEM268Q5VZI3 342 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 SUMF2Q8NBJ7 301 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 PRRX2Q99811 253 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 SUCNR1Q9BXA5 334 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 PIGMQ9H3S5 423 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 TMEM33P57088 247 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 UBE2NP61088 152 aaKnown RBP13.45□□□□□ -0.26
LRFN1-201ENST00000248668 DEFB109BQ30KR1 87 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 CXorf67Q86X51 503 aaPredicted RBP13.45□□□□□ -0.26
LRFN1-201ENST00000248668 SLC35G3Q8N808 338 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 OR5A2Q8NGI9 324 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 STOML3Q8TAV4 291 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 ZDHHC11Q9H8X9 412 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 FZR1Q9UM11 496 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 ZNF318Q5VUA4 2279 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 ACACAQ13085 2346 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 DEDDO75618 318 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms