RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PIGYQ3MUY2 71 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 TDRG1Q3Y452 100 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 SPSB3Q6PJ21 355 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 Q6ZS52 159 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 OR5C1Q8NGR4 320 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 TWSG1Q9GZX9 223 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 BLACEA4D250 179 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 NKX2-6A6NCS4 301 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 G3V3Y1 287 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 PATE4P0C8F1 98 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF92Q03936 586 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 C17orf67Q0P5P2 114 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 Q6ZVH6 145 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 LYZL4Q96KX0 146 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 ZNF665Q9H7R5 613 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 UBE2J1Q9Y385 318 aaPredicted RBP12.28□□□□□ -0.44
PCDHB3-201ENST00000231130 CEACAM18A8MTB9 384 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 SERPINE3A8MV23 424 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 IGHMP01871 453 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 LMO1P25800 156 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 BLKP51451 505 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 SUCLG1P53597 346 aaKnown RBP12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 UCP2P55851 309 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 RTP5Q14D33 572 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 TESK1Q15569 626 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 VN1R17PQ8TDU5 208 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 HLA-CQ95604 372 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 DOCK7Q96N67 2140 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.44
PCDHB3-201ENST00000231130 DUSP1P28562 367 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 GALR1P47211 349 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 CSNK1A1P48729 337 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 DPPA3Q6W0C5 159 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 NOXO1Q8NFA2 376 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 SMDT1Q9H4I9 107 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 TUBD1Q9UJT1 453 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 A0A1W2PQD3 144 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 OR2J2O76002 312 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 CRYABP02511 175 aaKnown RBP12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 HERV-K104P61576 105 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 CXorf66Q5JRM2 361 aaPredicted RBP12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 MYPOPQ86VE0 399 aaPredicted RBP12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 ZNF709Q8N972 641 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 CIB3Q96Q77 187 aaPredicted RBP12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 ZNF442Q9H7R0 627 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 HS3ST3A1Q9Y663 406 aa12.27□□□□□ -0.45
PCDHB3-201ENST00000231130 LTBP2Q14767 1821 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 A0A0U1RQK1 487 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 TMEM210A6NLX4 147 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 IGHEP01854 428 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 CCKARP32238 428 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 TMEM187Q14656 261 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 MMDQ15546 238 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 OR2C3Q8N628 320 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 A0A1B0GU03 582 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 NAT6Q93015 286 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 TXN2Q99757 166 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 VAMP8Q9BV40 100 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 NECAP2Q9NVZ3 263 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 TRBV11-1A0A0K0K1C0 115 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 A0A1W2PR80 420 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 B4DEV8 164 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 GNRHRP30968 328 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 RBX1P62877 108 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 RAB35Q15286 201 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 TMEM41BQ5BJD5 291 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 ERASQ7Z444 233 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 TMEM256Q8N2U0 113 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 OR10G3Q8NGC4 313 aa12.26□□□□□ -0.45
PCDHB3-201ENST00000231130 IGKV3D-11A0A0A0MRZ8 115 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 HMGB3O15347 200 aaKnown RBP12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 OR7C1O76099 320 aaPredicted RBP12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 NKX2-1P43699 371 aaPredicted RBP12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 CLEC2AQ6UVW9 174 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 SLC25A26Q70HW3 274 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 ZNF695Q8IW36 515 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 C7orf61Q8IZ16 206 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 NKX2-4Q9H2Z4 354 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 ALKBH4Q9NXW9 302 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 CARD18P57730 90 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 HIST1H3AP68431 136 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 ZNF154Q13106 437 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 LIAT1Q6ZQX7 453 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 FBXL14Q8N1E6 418 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 FAM89BQ8N5H3 189 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 OIT3Q8WWZ8 545 aa12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 MRPL13Q9BYD1 178 aaKnown RBP12.25□□□□□ -0.45
PCDHB3-201ENST00000231130 ARV1Q9H2C2 271 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms