RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 ZNF436Q9C0F3 470 aaPredicted RBP6.89□□□□□ -1.31
NANOG-201ENST00000229307 ARV1Q9H2C2 271 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 ZDHHC11Q9H8X9 412 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 YAE1D1Q9NRH1 226 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 CLEC18AA5D8T8 446 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 TXNL1O43396 289 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 SSSCA1O60232 199 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 CST4P01036 141 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 KRASP01116 189 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 OR4E1P0C645 316 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 PXDC1Q5TGL8 231 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 H3F3CQ6NXT2 135 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 CLEC18CQ8NCF0 446 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 OR14K1Q8NGZ2 314 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 ANXA10Q9UJ72 324 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 PRNDQ9UKY0 176 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 PINLYPA6NC86 204 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 CYB5R3P00387 301 aaPredicted RBP6.89□□□□□ -1.31
NANOG-201ENST00000229307 RBP4P02753 201 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 F2RP25116 425 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 AESQ08117 197 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 DTX1Q86Y01 620 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 MRPL24Q96A35 216 aaKnown RBP6.89□□□□□ -1.31
NANOG-201ENST00000229307 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
NANOG-201ENST00000229307 MISP3Q96FF7 219 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 MTFP1Q9UDX5 166 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 PLEKHB1Q9UF11 243 aaPredicted RBP6.89□□□□□ -1.31
NANOG-201ENST00000229307 IGKV3D-15A0A087WSY6 115 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 C3orf85A0A1B0GTC6 90 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 FAM157AC9JC47 383 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 CD200P41217 278 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 GZMKP49863 264 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 OR5T1Q8NG75 326 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 WDR13Q9H1Z4 485 aa6.89□□□□□ -1.31
NANOG-201ENST00000229307 DOCK4Q8N1I0 1966 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 GIPP09681 153 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 HTR1DP28221 377 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 OPRK1P41145 380 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 KIR3DL2P43630 455 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 OR2B8PP59922 312 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 SEZ6L2Q6UXD5 910 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ABHD14AQ9BUJ0 271 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 TMEM147Q9BVK8 224 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 KLHDC2Q9Y2U9 406 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 C2orf16Q68DN1 1984 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ZNF729A6NN14 1252 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 DNASE2O00115 360 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 CT45A10P0DMU9 189 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 BAMBIQ13145 260 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 MMDQ15546 238 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 SSX2Q16385 188 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 FAM90A1Q86YD7 464 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 C14orf79Q96F83 325 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 MRPL22Q9NWU5 206 aaKnown RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 IDI2-AS1Q9NZ38 188 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ZNF230Q9UIE0 474 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 TIMM9Q9Y5J7 89 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 AHCTF1Q8WYP5 2266 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 A0A0B4J2A0 478 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 LOC105371267A0A1B0GV96 52 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 MBD3L4A6NDZ8 208 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 MBD3L3A6NE82 208 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 MBD3L5A6NJ08 208 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 IAPPP10997 89 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 HTD2P86397 168 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 OR5H6Q8NGV6 325 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 MBD3L2Q8NHZ7 208 aaPredicted RBP6.88□□□□□ -1.31
NANOG-201ENST00000229307 RPS4Y2Q8TD47 263 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 R3HDM4Q96D70 268 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 MALSU1Q96EH3 234 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 RAB40CQ96S21 281 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 TMUB1Q9BVT8 246 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 NAA60Q9H7X0 242 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 SHPKQ9UHJ6 478 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 PIKFYVEQ9Y2I7 2098 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 C17orf100A8MU93 164 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ALX3O95076 343 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 PTGDSP41222 190 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 PSMB3P49720 205 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 LSM11P83369 360 aaKnown RBP eCLIP6.88□□□□□ -1.31
NANOG-201ENST00000229307 FAM3AP98173 230 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 FNDC7Q5VTL7 733 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 LINC00114Q6XXX2 140 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 LINC00469Q8N7U9 141 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 OR10AC1Q8NH08 325 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ACY3Q96HD9 319 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 FAM206AQ9NX38 181 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 ST6GALNAC2Q9UJ37 374 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 OR2W1Q9Y3N9 320 aa6.88□□□□□ -1.31
NANOG-201ENST00000229307 I3L521 148 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms