RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TMEM252Q8N6L7 170 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 WFIKKN1Q96NZ8 548 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 NGFP01138 241 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 CD8AP01732 235 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 P2RY1P47900 373 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 KRTDAPP60985 99 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 SLC10A1Q14973 349 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 LINC00114Q6XXX2 140 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 TMEM18Q96B42 140 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF107Q9UII5 783 aaPredicted RBP11.98□□□□□ -0.49
NFKB1-201ENST00000226574 BTBD17A6NE02 478 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 CDIPTO14735 213 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 CRYAAP02489 173 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 TMEM241Q24JQ0 296 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 HIST1H2BAQ96A08 127 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 PTX4Q96A99 478 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 APOBEC3DQ96AK3 386 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 AP1S3Q96PC3 154 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 SPSB2Q99619 263 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 LIN7CQ9NUP9 197 aaKnown RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 STARD10Q9Y365 291 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 POMT1Q9Y6A1 747 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 LYZL6O75951 148 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 CD74P04233 296 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 IGKV3-11P04433 115 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 GPR12P47775 334 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 NPBWR2P48146 333 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 LSM6P62312 80 aaKnown RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 GNG3P63215 75 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 RPP30P78346 268 aaKnown RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 SURF2Q15527 256 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 OR8B8Q15620 311 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 C6orf15Q6UXA7 325 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 TUSC5Q8IXB3 177 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 NOTCH4Q99466 2003 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 TMEM14DPA8MWL7 114 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 SYNGR2O43760 224 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 SEC11BP0C7V7 166 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 SMIM6P0DI80 62 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 PGA4P0DJD7 388 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 RAC3P60763 192 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 DBX2Q6ZNG2 339 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 SLC25A45Q8N413 288 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 OR10AD1Q8NGE0 317 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 MRGPRDQ8TDS7 321 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 NTNG2Q96CW9 530 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF837Q96EG3 531 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-201ENST00000226574 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 PSG11Q9UQ72 335 aa11.97□□□□□ -0.49
NFKB1-201ENST00000226574 DEDDO75618 318 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 EFEMP2O95967 443 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 PSG2P11465 335 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 NDUFB7P17568 137 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 RAB4AP20338 218 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 GALR1P47211 349 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 LRRC75AQ8NAA5 344 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF319Q9P2F9 582 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 POLDIP2Q9Y2S7 368 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 TRAF3IP2O43734 574 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-201ENST00000226574 ISG15P05161 165 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 HES3Q5TGS1 186 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 FAM78BQ5VT40 261 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 H1FXQ92522 213 aaKnown RBP11.96□□□□□ -0.49
NFKB1-201ENST00000226574 GALMQ96C23 342 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 LOXL2Q9Y4K0 774 aa11.96□□□□□ -0.49
NFKB1-201ENST00000226574 LINC00587B1AMM8 73 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 FCGR3BO75015 233 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.5
NFKB1-201ENST00000226574 RNF126Q9BV68 326 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 TWSG1Q9GZX9 223 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 LRP5LA4QPB2 252 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 KLRC4-KLRK1H3BQV0 150 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 ZNF17P17021 662 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 Q3ZCU0 254 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 FLVCR1-AS1Q8TAF5 88 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 ADAMTS17Q8TE56 1095 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 OR2D2Q9H210 308 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 DOK5Q9P104 306 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.5
NFKB1-201ENST00000226574 FUT9Q9Y231 359 aa11.96□□□□□ -0.5
NFKB1-201ENST00000226574 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 BSCL2Q96G97 398 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-201ENST00000226574 SCARF2Q96GP6 870 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-201ENST00000226574 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-201ENST00000226574 TOX4O94842 621 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-201ENST00000226574 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 OR10G4Q8NGN3 311 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 OR10G9Q8NGN4 311 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 OR10G7Q8NGN6 311 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 FGF11Q92914 225 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 AQP10Q96PS8 301 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-201ENST00000226574 TGIF2-C20orf24A0A0A6YYL0 155 aa11.95□□□□□ -0.5
NFKB1-201ENST00000226574 F6UZH7 168 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms