RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TSC22D1Q15714 1073 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 C9orf135Q5VTT2 229 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 SNIP1Q8TAD8 396 aaKnown RBP14.81□□□□□ -0.04
USB1-201ENST00000219281 SMDT1Q9H4I9 107 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 GSN-AS1Q9NRJ2 163 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 CCL28Q9NRJ3 127 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 AP4M1O00189 453 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 TXNL1O43396 289 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 F10P00742 488 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 SP9P0CG40 484 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 CCL2P13500 99 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 OTX2P32243 289 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 Q0VFX4 171 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 PRDX4Q13162 271 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 HIKESHIQ53FT3 197 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 Q6ZS49 121 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 TIPARPQ7Z3E1 657 aaKnown RBP14.81□□□□□ -0.04
USB1-201ENST00000219281 Q8NFD4 153 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 NEK7Q8TDX7 302 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 DEPPQ9NTK1 212 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 ZNF727A8MUV8 499 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 M0R296 226 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 TNFSF12O43508 249 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 CYTIPO60759 359 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 NAPSAO96009 420 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 GDF1P27539 372 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 RUNX1Q01196 453 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 IL22RA1Q8N6P7 574 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 PLPPR1Q8TBJ4 325 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 YPEL4Q96NS1 127 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 SIGLEC12Q96PQ1 595 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 LIPGQ9Y5X9 500 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 NCKAP5O14513 1909 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 A0A096LPE4 126 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 A0A1W2PPZ6 126 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A10PA6NDY2 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A18PA6NE21 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A16PA6NEW6 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A20PA6NIJ5 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A8PA6NJQ4 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A7PA6NKC0 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A22PA8MWA6 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A12PA8MX19 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A5PA8MXJ8 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A23PA8MXZ1 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 H3BQ15 152 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 CHST1O43916 411 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 CLN5O75503 358 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FBP1P09467 338 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A15PP0C7V4 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A13PP0C7W8 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A14PP0C7W9 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 FAM90A24PP0C7X0 464 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 MAS1LP35410 378 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 NMSQ5H8A3 153 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 TCTEX1D2Q8WW35 142 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 CPNE4Q96A23 557 aaPredicted RBP14.8□□□□□ -0.04
USB1-201ENST00000219281 TCEAL7Q9BRU2 100 aa14.8□□□□□ -0.04
USB1-201ENST00000219281 LNP1A1A4G5 178 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 PINLYPA6NC86 204 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 IFNA17P01571 189 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 SRP19P09132 144 aaKnown RBP14.79□□□□□ -0.04
USB1-201ENST00000219281 FGF12P61328 243 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 ID3Q02535 119 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 ZNF154Q13106 437 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 DCAF12Q5T6F0 453 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 HEPN1Q6WQI6 88 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 COLCA1Q6ZS62 124 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 RAB39BQ96DA2 213 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 LOXL2Q9Y4K0 774 aa14.79□□□□□ -0.04
USB1-201ENST00000219281 IGKV1-6A0A0C4DH72 117 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 CLEC18AA5D8T8 446 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 ZNF732B4DXR9 585 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 ZNF883P0CG24 379 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 VDAC1P21796 283 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 UCP1P25874 307 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 ARF1P84077 181 aaKnown RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 FOXO1Q12778 655 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 SRSF7Q16629 238 aaKnown RBP eCLIP14.78□□□□□ -0.04
USB1-201ENST00000219281 NCMAPQ5T1S8 102 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 PPP1R32Q7Z5V6 425 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 CLEC18CQ8NCF0 446 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 OR8G5Q8NG78 346 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 POM121Q96HA1 1249 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 ABHD14BQ96IU4 210 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 REPIN1Q9BWE0 567 aaKnown RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 MTCH1Q9NZJ7 389 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 KIAA1456Q9P272 454 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 NOSIPQ9Y314 301 aaKnown RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 BTBD17A6NE02 478 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 H0YL77 283 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 WRBO00258 174 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 TAGLN2P37802 199 aaKnown RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 EIF2S3P41091 472 aaKnown RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 RPS10P46783 165 aaKnown RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 MUCL1Q96DR8 90 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 GNPNAT1Q96EK6 184 aaPredicted RBP14.78□□□□□ -0.04
USB1-201ENST00000219281 TCFL5Q9UL49 500 aa14.78□□□□□ -0.04
USB1-201ENST00000219281 C5orf49A4QMS7 147 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 MRPL33O75394 65 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms