RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NGFP01138 241 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 HES1Q14469 280 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 OR51M1Q9H341 326 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 RNF122Q9H9V4 155 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CISD1Q9NZ45 108 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 DUSP13Q9UII6 198 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 YBX2Q9Y2T7 364 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 FER1L5A0AVI2 2057 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MS4A18H0YCH9 400 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 H3BQ15 152 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 NDUFB3O43676 98 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MPGP29372 298 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MS4A18Q3C1V0 323 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 NHLRC3Q5JS37 347 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CST9Q5W186 159 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 PSMG3Q9BT73 122 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 PARP12Q9H0J9 701 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 OR2D2Q9H210 308 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CHODLQ9H9P2 273 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 LOC390937A0A1W2PQ73 354 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 RPL36A-HNRNPH2H7BZ11 118 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CYR61O00622 381 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 BGLAPP02818 100 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CXCL3P19876 107 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 LPAR6P43657 344 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 KLF3P57682 345 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 RPS11P62280 158 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD9-201ENST00000219084 MESTQ5EB52 335 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 OR2M7Q8NG81 312 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 LSM10Q969L4 123 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 NRSN2Q9GZP1 204 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SAP30LQ9HAJ7 183 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 DMRT1Q9Y5R6 373 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 H0Y8G0 127 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 PMELP40967 661 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SLC37A1P57057 533 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 C1orf100Q5SVJ3 147 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SPNS2Q8IVW8 549 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 OR10G3Q8NGC4 313 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SLC25A40Q8TBP6 338 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MRPL24Q96A35 216 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 VCX2Q9H322 139 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 ZFP64Q9NPA5 681 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 M0R2Z0 102 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 NRG2O14511 850 aaPredicted RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 CST7O76096 145 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 VENTXO95231 258 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 HTR1DP28221 377 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 OPRK1P41145 380 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SELENOTP62341 195 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 THSD4Q6ZMP0 1018 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 ETV3LQ6ZN32 361 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 Q6ZN92 141 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MRPL52Q86TS9 123 aaKnown RBP3.89□□□□□ -1.79
CHD9-201ENST00000219084 LRFN3Q9BTN0 628 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 MENTQ9BUN1 341 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 CFHR5Q9BXR6 569 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 TMEM222Q9H0R3 208 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 FAM234AQ9H0X4 552 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 ZNF576Q9H609 170 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SLC52A3Q9NQ40 469 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 LRRK1Q38SD2 2015 aa3.89□□□□□ -1.79
CHD9-201ENST00000219084 A0A087WWC5 75 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TRAV38-1A0A0B4J264 116 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SERTM2A0A1B0GWG4 89 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 A0A1W2PNR3 127 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 C7orf77A4D0Y5 90 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 HELTA6NFD8 242 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR2T8A6NH00 312 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR2A4O95047 310 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 NXPH3O95157 252 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ASAH2BP0C7U1 165 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 UCP3P55916 312 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF816Q0VGE8 651 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 C9orf135Q5VTT2 229 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TEPPQ6URK8 271 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 VN1R4Q7Z5H5 301 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 D2HGDHQ8N465 521 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 FAM24BQ8N5W8 94 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR2A7Q96R45 310 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 PHF3Q92576 2039 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF98A6NK75 572 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SPRY1O43609 319 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 CD74P04233 296 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 BMP5P22003 454 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 GNB1P62873 340 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 LTC4SQ16873 150 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 DHRS7BQ6IAN0 325 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 NUDT8Q8WV74 236 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SFXN3Q9BWM7 321 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 WSB2Q9NYS7 404 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 IL19Q9UHD0 177 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ERRFI1Q9UJM3 462 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 VSIG4Q9Y279 399 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZFP30Q9Y2G7 519 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 CACNA1IQ9P0X4 2223 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TRGV5A0A0B4J1U4 118 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TCRBV16S1A1N1A0A5B0 115 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms