RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CMSS1Q9BQ75 279 aaKnown RBP10.89□□□□□ -0.67
TIMP1-201ENST00000218388 RAB9BQ9NP90 201 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 C12orf4Q9NQ89 552 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.89□□□□□ -0.67
TIMP1-201ENST00000218388 C19orf12Q9NSK7 152 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 RABL2AQ9UBK7 228 aaPredicted RBP10.89□□□□□ -0.67
TIMP1-201ENST00000218388 EXTL2Q9UBQ6 330 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 KIF25Q9UIL4 384 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 TRAPPC2LQ9UL33 140 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 RABL2BQ9UNT1 228 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 UBE2J1Q9Y385 318 aaPredicted RBP10.89□□□□□ -0.67
TIMP1-201ENST00000218388 LINC00312Q9Y6C7 94 aa10.89□□□□□ -0.67
TIMP1-201ENST00000218388 AKAP9Q99996 3911 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 TPPPO94811 219 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF16P17020 682 aaPredicted RBP10.88□□□□□ -0.67
TIMP1-201ENST00000218388 GLP1RP43220 463 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 GLIPR1P48060 266 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 GNG2P59768 71 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF260Q3ZCT1 412 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 DCAF12L2Q5VW00 463 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 TRAT1Q6PIZ9 186 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 MOB1BQ7L9L4 216 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 LAX1Q8IWV1 398 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 KIR3DL3Q8N743 410 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 DIRAS2Q96HU8 199 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 WDFY2Q96P53 400 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 GAL3ST2Q9H3Q3 398 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
TIMP1-201ENST00000218388 HIF1ANQ9NWT6 349 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 AK3Q9UIJ7 227 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 MGAT4AQ9UM21 535 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 VPS13CQ709C8 3753 aa10.88□□□□□ -0.67
TIMP1-201ENST00000218388 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.67
TIMP1-201ENST00000218388 ABCA2Q9BZC7 2435 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 FLNAP21333 2647 aaKnown RBP10.87□□□□□ -0.67
TIMP1-201ENST00000218388 TMEM235A6NFC5 223 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 J3QLI3 93 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 CD5LO43866 347 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 MT-ND4P03905 459 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 GZMHP20718 246 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 TAS2R20P59543 309 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 HACD4Q5VWC8 232 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 TMEM200BQ69YZ2 307 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 IZUMO1Q8IYV9 350 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 GAPTQ8N292 157 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 DYRK2Q92630 601 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 CORO2AQ92828 525 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 MIXL1Q9H2W2 232 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 AUNIPQ9H7T9 357 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 PTTG2Q9NZH5 202 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 KCNIP1Q9NZI2 227 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 ONECUT1Q9UBC0 465 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 MRPS7Q9Y2R9 242 aaKnown RBP10.87□□□□□ -0.67
TIMP1-201ENST00000218388 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 KPTNQ9Y664 436 aa10.87□□□□□ -0.67
TIMP1-201ENST00000218388 MAP1AP78559 2803 aaPredicted RBP10.87□□□□□ -0.67
TIMP1-201ENST00000218388 TRBV6-6A0A0A6YYG2 114 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF729A6NN14 1252 aaPredicted RBP10.86□□□□□ -0.67
TIMP1-201ENST00000218388 M0R1W7 72 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 NAPSAO96009 420 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 RBP4P02753 201 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 MELTFP08582 738 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF728P0DKX0 622 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 PAX2Q02962 417 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF273Q14593 569 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 METTL11BQ5VVY1 283 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 OR4K15Q8NH41 348 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 SETD6Q8TBK2 473 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 MRPL30Q8TCC3 161 aaKnown RBP10.86□□□□□ -0.67
TIMP1-201ENST00000218388 DACT3Q96B18 629 aaPredicted RBP10.86□□□□□ -0.67
TIMP1-201ENST00000218388 OPN4Q9UHM6 478 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 MED13LQ71F56 2210 aa10.86□□□□□ -0.67
TIMP1-201ENST00000218388 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 SPINT2O43291 252 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 ORC5O43913 435 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 DTYMKP23919 212 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 TNFSF8P32971 234 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 CBX5P45973 191 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 SPANXN2Q5MJ10 180 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 OLFML2AQ68BL7 652 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 FAHD2BQ6P2I3 314 aaPredicted RBP10.85□□□□□ -0.67
TIMP1-201ENST00000218388 RTN4RL2Q86UN3 420 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 OR6Q1Q8NGQ2 317 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 OR13A1Q8NGR1 328 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 MRGPRDQ8TDS7 321 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 CCDC107Q8WV48 283 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms