RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 IGKV1-13P0DP09 117 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 OTX2P32243 289 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 TSPAN7P41732 249 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 GPM6AP51674 278 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 RPS23P62266 143 aaKnown RBP11.4□□□□□ -0.58
SRP54-201ENST00000216774 CCL20P78556 96 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 MRPL21Q7Z2W9 205 aaKnown RBP11.4□□□□□ -0.58
SRP54-201ENST00000216774 LINC00596Q86U02 117 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 IL22RA1Q8N6P7 574 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 PLPPR1Q8TBJ4 325 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 TCEAL3Q969E4 200 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 FGF23Q9GZV9 251 aaPredicted RBP11.4□□□□□ -0.58
SRP54-201ENST00000216774 MAGT1Q9H0U3 335 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
SRP54-201ENST00000216774 TMEM265A0A087WTH1 108 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 TRAPPC2LH3BP13 241 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 OR2C1O95371 312 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 IFNA17P01571 189 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 DYNLT3P51808 116 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 ARF1P84077 181 aaKnown RBP11.4□□□□□ -0.58
SRP54-201ENST00000216774 ADAM5Q6NVV9 412 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 RBMS3Q6XE24 437 aaKnown RBP11.4□□□□□ -0.58
SRP54-201ENST00000216774 ODF3L1Q8IXM7 274 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 APOBEC3DQ96AK3 386 aaPredicted RBP11.4□□□□□ -0.58
SRP54-201ENST00000216774 PLK3Q9H4B4 646 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 MTCH1Q9NZJ7 389 aa11.4□□□□□ -0.58
SRP54-201ENST00000216774 A0A087WWC5 75 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 CDRT15L2A8MXV6 281 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 AP4M1O00189 453 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 SLC34A2O95436 690 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 TMEM50AO95807 157 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 IGHV3-9P01782 118 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 SERPINA7P05543 415 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 CBR1P16152 277 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 S100GP29377 79 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 IL24Q13007 206 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 PEAR1Q5VY43 1037 aaPredicted RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 HEPN1Q6WQI6 88 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 NANPQ8TBE9 248 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 RBMXL1Q96E39 390 aaKnown RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 BOKQ9UMX3 212 aaPredicted RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 RNF115Q9Y4L5 304 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 IGKV1-6A0A0C4DH72 117 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 H3BQ15 152 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 WRBO00258 174 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 SLC25A6P12236 298 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 RAB2AP61019 212 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 RPS18P62269 152 aaKnown RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 TLE4Q04727 773 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 RNPS1Q15287 305 aaKnown RBP11.39□□□□□ -0.59
SRP54-201ENST00000216774 OR5A2Q8NGI9 324 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 NEK7Q8TDX7 302 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 ATP5SQ99766 215 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 ABHD14AQ9BUJ0 271 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 OPA3Q9H6K4 179 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 CCL28Q9NRJ3 127 aa11.39□□□□□ -0.59
SRP54-201ENST00000216774 C5orf49A4QMS7 147 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 PINLYPA6NC86 204 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 HSD17B6O14756 317 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 CHST1O43916 411 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 PGLYRP1O75594 196 aaPredicted RBP11.38□□□□□ -0.59
SRP54-201ENST00000216774 CST7O76096 145 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 CER1O95813 267 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 HBE1P02100 147 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 SRP19P09132 144 aaKnown RBP11.38□□□□□ -0.59
SRP54-201ENST00000216774 OR8U8P0C7N1 319 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 OR2B8PP59922 312 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 SSPNQ14714 243 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 ZNF506Q5JVG8 444 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 AKR1C8PQ5T2L2 129 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 DCAF12Q5T6F0 453 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 CDCP2Q5VXM1 449 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 SLC23A3Q6PIS1 610 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 SLC16A13Q7RTY0 426 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 TCTEX1D2Q8WW35 142 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 MUCL1Q96DR8 90 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 RFNGQ9Y644 331 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 DFFBO76075 338 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 WNT2P09544 360 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 CCNOP22674 350 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 F2RP25116 425 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 ITGA3P26006 1051 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 TMEM217Q8N7C4 229 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 HIST1H2AAQ96QV6 131 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 TAAR3PQ9P1P4 343 aa11.38□□□□□ -0.59
SRP54-201ENST00000216774 TRAV1-1A0A0B4J248 108 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 A0A1B0GU03 582 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
SRP54-201ENST00000216774 PAX9P55771 341 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 TAS2R30P59541 319 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 ICAM4Q14773 271 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 PCSK4Q6UW60 755 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms