RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 EWSR1Q01844 656 aaKnown RBP eCLIP11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 SKP2Q13309 424 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 UBALD2Q8IYN6 164 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
TGFBR3-201ENST00000212355 PGA3P0DJD8 388 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 ECSCRQ19T08 205 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 NUFIP2Q7Z417 695 aaKnown RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 VN1R17PQ8TDU5 208 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 RTN4RQ9BZR6 473 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 TEX50A0A1B0GTY4 177 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 GSTZ1O43708 216 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 MRPS11P82912 194 aaKnown RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 IL11RAQ14626 422 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 CEBPEQ15744 281 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 PDPNQ86YL7 162 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 IP6K3Q96PC2 410 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 TDRD6O60522 2096 aaKnown RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 CD81P60033 236 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 OR5AC2Q9NZP5 309 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 TCFL5Q9UL49 500 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 M0QZ24 198 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 OGG1O15527 345 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 SRSF10O75494 262 aaKnown RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 TFPI2P48307 235 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 MEOX2P50222 304 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM50BP56557 158 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 DHRS11Q6UWP2 260 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 LEAP2Q969E1 77 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 IGKV3D-15A0A087WSY6 115 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 ACAA1P09110 424 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 PRNTQ86SH4 94 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 FAM216AQ8WUB2 273 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 PSMB2P49721 201 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 COL10A1Q03692 680 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 IL13RA2Q14627 380 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 OR2H1Q9GZK4 316 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 SH2D2AQ9NP31 389 aa11.92□□□□□ -0.5
TGFBR3-201ENST00000212355 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 C1QL1O75973 258 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 VSIG10L2P0DP72 767 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 CXCL2P19875 107 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM65Q6PI78 240 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 ABHD14BQ96IU4 210 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 A0A087X0M5 115 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 A0A1B0GX30 115 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 PPYP01298 95 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 CST2P09228 141 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 VSIG8P0DPA2 414 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 OTX1P32242 354 aaPredicted RBP11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 PPOXP50336 477 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM183BQ1AE95 376 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 DTD1Q8TEA8 209 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 WDR34Q96EX3 536 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 AP5S1Q9NUS5 200 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 MDC1Q14676 2089 aaKnown RBP11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 MDP1Q86V88 176 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 ZPBPQ9BS86 351 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC17A5Q9NRA2 495 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 WNT16Q9UBV4 365 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 RNF24Q9Y225 148 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 SYNGR2O43760 224 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 D2HGDHQ8N465 521 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 OR6X1Q8NH79 312 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 RPS4Y2Q8TD47 263 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 ADAMTS17Q8TE56 1095 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 FAM222BQ8WU58 562 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 OR2J1Q9GZK6 312 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 PRSS50Q9UI38 385 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 CRHP06850 196 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 FBP1P09467 338 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 Q8IYB0 196 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 AMELYQ99218 206 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM218A2RU14 115 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 H3BQ15 152 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 IGHV3-48P01763 117 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 KLK2P20151 261 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 SRP14P37108 136 aaKnown RBP11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 KIR3DL2P43630 455 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 TMEM108Q6UXF1 575 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 OR4X1Q8NH49 305 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 RSG1Q9BU20 258 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 SLC7A10Q9NS82 523 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 MS4A18H0YCH9 400 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 UPK3AO75631 287 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 MS4A18Q3C1V0 323 aa11.9□□□□□ -0.5
TGFBR3-201ENST00000212355 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms