RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 FBXL17Q9UF56 701 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 GLS2Q9UI32 602 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 CNOT1A5YKK6 2376 aaKnown RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 RAB19A4D1S5 217 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF705EA8MWA4 302 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 FGF16O43320 207 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TIMM8AO60220 97 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 PGA5P0DJD9 388 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 PVALBP20472 110 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TUBG1P23258 451 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 PSG7Q13046 419 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 RTP5Q14D33 572 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 FAM76BQ5HYJ3 339 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 SHEQ5VZ18 495 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF880Q6PDB4 577 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 WDR86Q86TI4 376 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 OR1S2Q8NGQ3 325 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 IL1F10Q8WWZ1 152 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 BOD1Q96IK1 185 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TUBG2Q9NRH3 451 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TMEM100Q9NV29 134 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 TRAPPC2LQ9UL33 140 aa7.03□□□□□ -1.28
VAMP3-201ENST00000054666 ARID1AO14497 2285 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 BORCS7-ASMTA0A0B4J1R7 106 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 IGKV1D-13A0A0B4J2D9 117 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 A6NLC8 198 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 H0Y980 276 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 CDIPTO14735 213 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 SH2D1BO14796 132 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 HSPA12AO43301 675 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 GPR137BO60478 399 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 AGFG2O95081 481 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 OR2H2O95918 312 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 GRPP07492 148 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 IGKV1-13P0DP09 117 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 GCH1P30793 250 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 MPV17P39210 176 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 P2RY1P47900 373 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 KCNJ3P48549 501 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 TMEM33P57088 247 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 P2RY6Q15077 328 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 TUSC1Q2TAM9 212 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 EIF2S3LQ2VIR3 472 aaKnown RBP7.02□□□□□ -1.29
VAMP3-201ENST00000054666 FAM209AQ5JX71 171 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 Q6P435 159 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 BHLHA15Q7RTS1 189 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-201ENST00000054666 CXorf67Q86X51 503 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-201ENST00000054666 LDLRAD3Q86YD5 345 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 STPG2Q8N412 459 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 PRSS33Q8NF86 280 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 OR52M1Q8NGK5 317 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 LHFPL5Q8TAF8 219 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 TMEM56Q96MV1 263 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 NRIP2Q9BQI9 281 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 LPAR3Q9UBY5 353 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 PURGQ9UJV8 347 aaKnown RBP7.02□□□□□ -1.29
VAMP3-201ENST00000054666 AMDHD2Q9Y303 409 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 OR2W1Q9Y3N9 320 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 POMT1Q9Y6A1 747 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 TMEM56-RWDD3S4R434 201 aa7.02□□□□□ -1.29
VAMP3-201ENST00000054666 IGKV1-6A0A0C4DH72 117 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MBD3L4A6NDZ8 208 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MBD3L3A6NE82 208 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MBD3L5A6NJ08 208 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 SLC33A1O00400 549 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 CECR9P0C854 216 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 RCC1P18754 421 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 NKX2-1P43699 371 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MZT1Q08AG7 82 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 FOXF2Q12947 444 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 ZNF146Q15072 292 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 ZNF718Q3SXZ3 478 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 IGFL3Q6UXB1 125 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 C1orf174Q8IYL3 243 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 H1FOOQ8IZA3 346 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 WDR31Q8NA23 367 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 OR8G5Q8NG78 346 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MBD3L2Q8NHZ7 208 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 C17orf50Q8WW18 174 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 SAT2Q96F10 170 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 TAAR6Q96RI8 345 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 SMIM3Q9BZL3 60 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 OPN3Q9H1Y3 402 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 CXXC4Q9H2H0 198 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MMP26Q9NRE1 261 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 CCL28Q9NRJ3 127 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 PLSCR4Q9NRQ2 329 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 TAAR3PQ9P1P4 343 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 TINAGQ9UJW2 476 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 RCL1Q9Y2P8 373 aaKnown RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 RBM7Q9Y580 266 aaKnown RBP7.01□□□□□ -1.29
VAMP3-201ENST00000054666 NPIPB11E5RHQ5 1161 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 MED6O75586 246 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 HAND1O96004 215 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 APOC3P02656 99 aa7.01□□□□□ -1.29
VAMP3-201ENST00000054666 VDAC1P21796 283 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms