RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 THAP6Q8TBB0 222 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 PLPPR1Q8TBJ4 325 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 TAAR3PQ9P1P4 343 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 SPTBN4Q9H254 2564 aa12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 ANKRD11Q6UB99 2663 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-201ENST00000023939 ZSCAN5BA6NJL1 495 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 ATP6V1G2-DDX39BF2Z307 99 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 S100A1P23297 94 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 PTAFRP25105 342 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 GNRHRP30968 328 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 PAX5Q02548 391 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 TMEM108Q6UXF1 575 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 ACOT7LQ6ZUV0 252 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 H1FOOQ8IZA3 346 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 OR2Z1Q8NG97 314 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 OR5T2Q8NGG2 359 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 RND1Q92730 232 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 ARL6Q9H0F7 186 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 METTL8Q9H825 291 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 PRR13Q9NZ81 148 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 DUSP13Q9UII6 198 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 MEMO1Q9Y316 297 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 MAB21L2Q9Y586 359 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 FRYQ5TBA9 3013 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 ASPMQ8IZT6 3477 aa12.07□□□□□ -0.48
RTFDC1-201ENST00000023939 BET1O15155 118 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 MPPED1O15442 326 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 RP2O75695 350 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 RCC1P18754 421 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 SRPXP78539 464 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 KLRB1Q12918 225 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 EXOSC2Q13868 293 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 HMGN3Q15651 99 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 PRR14LQ5THK1 2151 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 SLC35E4Q6ICL7 350 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 LILRB1Q8NHL6 650 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 OR10C1Q96KK4 312 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 RNF126Q9BV68 326 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 UBQLN2Q9UHD9 624 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 IGHV3-64DA0A0J9YX35 117 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 TMEM30CPA0ZSE6 113 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 TUBAL3A6NHL2 446 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 GPR31O00270 319 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 WNT9BO14905 357 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 CFDP00746 253 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 IFNA21P01568 189 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 WNT2P09544 360 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 OR5AC1P0C628 307 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 GATA4P43694 442 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 ID4P47928 161 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 SELENOVP59797 346 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 LGI3Q8N145 548 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 ZNF565Q8N9K5 539 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 OR10J5Q8NHC4 309 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 GLYATL2Q8WU03 294 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 MSI2Q96DH6 328 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 MEGF10Q96KG7 1140 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 C18orf12Q96KH6 178 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 OR2W1Q9Y3N9 320 aa12.06□□□□□ -0.48
RTFDC1-201ENST00000023939 DCHS1Q96JQ0 3298 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 MPTX1A8MV57 137 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 PSPNO60542 156 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 B3GALNT1O75752 331 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 HOXB5P09067 269 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 PRSS54Q6PEW0 395 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 MRPL24Q96A35 216 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 KIRREL1Q96J84 757 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 SLC5A7Q9GZV3 580 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 UFSP2Q9NUQ7 469 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 TRAPPC2LQ9UL33 140 aa12.05□□□□□ -0.48
RTFDC1-201ENST00000023939 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 THBDP07204 575 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 PET100P0DJ07 73 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 ESCO2Q56NI9 601 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 CLLU1Q5K131 121 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 GGNBP1Q5YKI7 109 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 C5orf24Q7Z6I8 188 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 OR11L1Q8NGX0 322 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 MRPL37Q9BZE1 423 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 OR14J1Q9UGF5 321 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 SH3BGRL2Q9UJC5 107 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 CFAP47Q6ZTR5 3102 aa12.04□□□□□ -0.48
RTFDC1-201ENST00000023939 C3orf85A0A1B0GTC6 90 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 hCG_1807616A0A1W2PRN6 198 aa12.03□□□□□ -0.48
RTFDC1-201ENST00000023939 H0YIZ8 118 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms