RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF488Q96MN9 340 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 KIAA1456Q9P272 454 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 URB1O60287 2271 aaKnown RBP12.04□□□□□ -0.48
USH1C-201ENST00000005226 DOCK7Q96N67 2140 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 TRAV39A0A0B4J263 110 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 CCL4P13236 92 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 SSR4P51571 173 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 GPM6AP51674 278 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 DNASE2BQ8WZ79 361 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 IMMP1LQ96LU5 166 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 RSG1Q9BU20 258 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 TMEM56-RWDD3S4R434 201 aa12.04□□□□□ -0.48
USH1C-201ENST00000005226 DIDO1Q9BTC0 2240 aaKnown RBP12.04□□□□□ -0.48
USH1C-201ENST00000005226 A0A096LPE4 126 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 A0A1W2PPZ6 126 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 RPL36A-HNRNPH2H7BZ11 118 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 COX6A1P12074 109 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 S100A2P29034 98 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 HAAOP46952 286 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 RAB11AP62491 216 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 EXT1Q16394 746 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 WIPI1Q5MNZ9 446 aaPredicted RBP12.03□□□□□ -0.48
USH1C-201ENST00000005226 LCN15Q6UWW0 184 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 RPS19BP1Q86WX3 136 aaKnown RBP12.03□□□□□ -0.48
USH1C-201ENST00000005226 OR51H1Q8NH63 302 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 TVP23CQ96ET8 276 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 SLC25A31Q9H0C2 315 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 GAR1Q9NY12 217 aaKnown RBP12.03□□□□□ -0.48
USH1C-201ENST00000005226 ZNF816-ZNF321PA0A0X1KG74 233 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
USH1C-201ENST00000005226 SLC34A2O95436 690 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 TK1P04183 234 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 ID3Q02535 119 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 UBALD1Q8TB05 177 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 INTS12Q96CB8 462 aaKnown RBP12.03□□□□□ -0.48
USH1C-201ENST00000005226 NIPSNAP3BQ9BS92 247 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 R4GN57 208 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 ARHGAP21Q5T5U3 1957 aa12.03□□□□□ -0.48
USH1C-201ENST00000005226 ZNF716A6NP11 495 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.48
USH1C-201ENST00000005226 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 NMSQ5H8A3 153 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 SLC25A24Q6NUK1 477 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 C20orf204Q6ZNR8 217 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 CCDC54Q8NEL0 328 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 SSX3Q99909 188 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 Q9N2K0 584 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 NCKAP5O14513 1909 aa12.02□□□□□ -0.48
USH1C-201ENST00000005226 CLDN15P56746 228 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 RAC3P60763 192 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 SP5Q6BEB4 398 aaPredicted RBP12.02□□□□□ -0.49
USH1C-201ENST00000005226 ABHD5Q8WTS1 349 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 FRZBQ92765 325 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 ZNF665Q9H7R5 613 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 WDFY4Q6ZS81 3184 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 ZNF732B4DXR9 585 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 HS3ST1O14792 307 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 CBR3O75828 277 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 FOXG1P55316 489 aaPredicted RBP12.02□□□□□ -0.49
USH1C-201ENST00000005226 Q6ZRM9 215 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 SSX7Q7RTT5 188 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 GGNQ86UU5 652 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 OR10D3Q8NH80 312 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 CPT1CQ8TCG5 803 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 DMRT1Q9Y5R6 373 aa12.02□□□□□ -0.49
USH1C-201ENST00000005226 KLF7O75840 302 aaPredicted RBP12.01□□□□□ -0.49
USH1C-201ENST00000005226 IAPPP10997 89 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 GLIPR1P48060 266 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 ZNF880Q6PDB4 577 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 WDR5BQ86VZ2 330 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 ZNF295-AS1Q8N0V1 137 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 SPIN2AQ99865 258 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 SPIN2BQ9BPZ2 258 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 CXorf65A6NEN9 183 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 SYNGR1O43759 233 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 PGLYRP1O75594 196 aaPredicted RBP12.01□□□□□ -0.49
USH1C-201ENST00000005226 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 VDAC1P21796 283 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
USH1C-201ENST00000005226 OR8B8Q15620 311 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 KHDC3LQ587J8 217 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 RDH5Q92781 318 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 PCED1AQ9H1Q7 454 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 PRO1933Q9H354 126 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms