RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 OR2W1Q9Y3N9 320 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 SSX4O60224 188 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 ARG1P05089 322 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 CD200P41217 278 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 RAG2P55895 527 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 SLC38A11Q08AI6 406 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 DHRS2Q13268 280 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 C10orf128Q5T292 105 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 TBC1D26Q86UD7 250 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 CADM3Q8N126 398 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 GCSAMQ8N6F7 178 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 KLF14Q8TD94 323 aaPredicted RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF331Q9NQX6 463 aaPredicted RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 PRNDQ9UKY0 176 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 C9orf170A2RU37 121 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 PPYP01298 95 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 FGF12P61328 243 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 IRF3Q14653 427 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 OR5R1Q8NH85 324 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 PTX4Q96A99 478 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 WDR89Q96FK6 387 aaPredicted RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 HARBI1Q96MB7 349 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 CHRDL1Q9BU40 450 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 ONECUT2O95948 504 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 OR13C7P0DN81 318 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 APOBEC3AP31941 199 aaPredicted RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 SNX22Q96L94 193 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF488Q96MN9 340 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 PKIBQ9C010 78 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 KPTNQ9Y664 436 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 ASXL3Q9C0F0 2248 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 UMAD1C9J7I0 102 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 K7N7A8 449 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 DUS4LO95620 317 aaKnown RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 OPN1MWP04001 364 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 METTL15P1P0C7V9 234 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 OPN1MW2P0DN77 364 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 OPN1MW3P0DN78 364 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 SLC25A4P12235 298 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 FSTP19883 344 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 GGNBP1Q5YKI7 109 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 C1orf162Q8NEQ5 155 aaPredicted RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 LHFPL6Q9Y693 200 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 GSTZ1O43708 216 aaPredicted RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 CLDN14O95500 239 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 CNN1P51911 297 aaKnown RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 SUCLG1P53597 346 aaKnown RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 MMDQ15546 238 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 C11orf87Q6NUJ2 197 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 BPIFCQ8NFQ6 507 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 CHODLQ9H9P2 273 aa8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 PATZ1Q9HBE1 687 aaKnown RBP8.98□□□□□ -0.97
NIPAL3-201ENST00000003912 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 DCTN6O00399 190 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 NQO2P16083 231 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 HAGHQ16775 308 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 ATP6V1FQ16864 119 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 SLC16A12Q6ZSM3 486 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 SLC25A32Q9H2D1 315 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF646O15015 1829 aaPredicted RBP8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 RAB19A4D1S5 217 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 DHRS7CA6NNS2 312 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 NAT2P11245 290 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 P2RX3P56373 397 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 FADS6Q8N9I5 356 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 OR1L4Q8NGR5 311 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF552Q9H707 407 aaPredicted RBP8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 A1L4Q6 167 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 RAB29O14966 203 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 SYNGR1O43759 233 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 GAPDHP04406 335 aaKnown RBP8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 NANOS3P60323 173 aaKnown RBP8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 NAAAQ02083 359 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 TMEM123Q8N131 208 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 GAPTQ8N292 157 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 WNT5BQ9H1J7 359 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 KLK13Q9UKR3 277 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 BCL2L11O43521 198 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 OR5I1Q13606 314 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 FOXB2Q5VYV0 432 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 FLVCR1-AS1Q8TAF5 88 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 SAT2Q96F10 170 aaPredicted RBP8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 GSX2Q9BZM3 304 aa8.97□□□□□ -0.97
NIPAL3-201ENST00000003912 IGHV1-69-2A0A0G2JMI3 117 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 GNG7O60262 68 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ZIC3O60481 467 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ISG15P05161 165 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 MPV17P39210 176 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ACSF3Q4G176 576 aaPredicted RBP8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 FNDC7Q5VTL7 733 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 VWA1Q6PCB0 445 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF788Q6ZQV5 615 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 TRBV23-1A0A0A0MS06 115 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF705FA8MVS1 300 aaPredicted RBP8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 FAM106CPP0CH98 169 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF705DP0CH99 300 aaPredicted RBP8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF705BP0CI00 300 aaPredicted RBP8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 FAM27E3Q08E93 113 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms