RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 P20040 264 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 GdnfP48540 211 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Aqp2P56402 271 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Usf1Q61069 310 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1477Q7TQQ7 315 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Rcc2Q8BK67 520 aaKnown RBP12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem17Q8K0U3 198 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Glb1lQ8VC60 646 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Duoxa1Q8VE49 341 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 Zfp959Q91VM8 539 aa12.8□□□□□ -0.36
Nup88-202ENSMUST00000108530 AtrxQ61687 2476 aaKnown RBP12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr455A0A0B4J1M2 317 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 ActbP60710 375 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ube2mP61082 183 aaKnown RBP12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Actg1P63260 375 aaKnown RBP12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Adgrg5Q3V3Z3 524 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr331Q5NC44 324 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Rpl35Q6ZWV7 123 aaKnown RBP12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Zfp947Q8BIQ6 437 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm5447Q8BPB2 115 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Fam234bQ8BYI8 624 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Dhrs7cQ8CHS7 311 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 GmppaQ922H4 420 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Smim3Q99PE5 60 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Asb12Q9D738 308 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 1700025F22RikQ9D9Y7 111 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Eif3fQ9DCH4 361 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Icam4Q9ERM2 262 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Igkv14-111A0A140T8P9 117 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm12666A2AMD0 254 aaKnown RBP12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vmn2r66K7N6R9 851 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Alox12bO70582 701 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 NgfP01139 241 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Saa2P05367 122 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 PtcraP0C6B2 199 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Irf2P23906 349 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Anxa11P97384 503 aaKnown RBP12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Rgs16P97428 201 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tas2r116Q7M713 305 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1111Q7TR55 312 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Plcxd3Q8BLJ3 321 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 CenpoQ8K015 298 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vmn1r179Q8R2B4 323 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Nt5mQ8VCE6 220 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmem19Q91W52 336 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Mrpl39Q9JKF7 336 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 SclyQ9JLI6 432 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Mapk7Q9WVS8 806 aa12.79□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1130A0A1L1SQT2 314 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1129A2AV41 314 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Klri1B2KG20 248 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr173E9QAT7 321 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm9493F6SVV1 192 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm21761J3QK00 171 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1221L7MU53 311 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 UcnP81615 122 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Slc34a1Q60825 637 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tex261Q62302 196 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Utf1Q6J1H4 339 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Zfp82Q6P9Y7 530 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Clvs2Q8BG92 327 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Slc25a32Q8BMG8 316 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gpr137bQ8BNQ3 385 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Pqlc2Q8C4N4 293 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 D330020A13RikQ8C799 211 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Vmn1r19Q8R2C7 308 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 2210010C04RikQ9CPN9 247 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Q9CWB7 115 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 MrnipQ9D1F5 335 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Mgat4cQ9D306 478 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 ApooQ9DCZ4 198 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gnpnat1Q9JK38 184 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Eif2s3xQ9Z0N1 472 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tln1P26039 2541 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Sec16aA2AIX1 2377 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1438-ps1A0A140LHS9 319 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Igkv13-84A0A140T8N3 115 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 3110021N24RikJ3QMN2 152 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Olfr1564K7N6V7 318 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 MstnO08689 376 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Wsb1O54927 421 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ccl3P10855 92 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 PtgfrP43117 366 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Rps27aP62983 156 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 St6galnac2P70277 373 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Q149G0 166 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 FcrlbQ5DRQ8 427 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tle1Q62440 770 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Bhlhe23Q8BGW3 223 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Tmprss11gQ8BZ10 417 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Pear1Q8VIK5 1034 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Znf593Q9DB42 134 aaKnown RBP12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Clec4dQ9Z2H6 219 aa12.78□□□□□ -0.36
Nup88-202ENSMUST00000108530 Ighv1-13A0A075B5I0 98 aa12.77□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm8857L7N291 182 aa12.77□□□□□ -0.36
Nup88-202ENSMUST00000108530 EhfO70273 300 aa12.77□□□□□ -0.36
Nup88-202ENSMUST00000108530 Wnt5aP22725 380 aa12.77□□□□□ -0.36
Nup88-202ENSMUST00000108530 PvalbP32848 110 aa12.77□□□□□ -0.36
Nup88-202ENSMUST00000108530 Gm648Q3UJ22 213 aa12.77□□□□□ -0.36
Nup88-202ENSMUST00000108530 A230072I06RikQ3UUJ8 172 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms