RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C18orf12Q96KH6 178 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 LIPGQ9Y5X9 500 aa12.58□□□□□ -0.4
SCARB2-221ENST00000640341 IGKV1D-13A0A0B4J2D9 117 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 PINLYPA6NC86 204 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 IGKV1-13P0DP09 117 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 FGF5P12034 268 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF154Q13106 437 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 C3AR1Q16581 482 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 MRPL21Q7Z2W9 205 aaKnown RBP12.57□□□□□ -0.4
SCARB2-221ENST00000640341 OR2V1Q8NHB1 315 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-221ENST00000640341 SLC35B3Q9H1N7 401 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 WDR54Q9H977 334 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 OR6C6A6NF89 314 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 NGFP01138 241 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 HEXAP06865 529 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 CELA3AP09093 270 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 ARF1P84077 181 aaKnown RBP12.57□□□□□ -0.4
SCARB2-221ENST00000640341 GGNQ86UU5 652 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 CPT1CQ8TCG5 803 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 HES7Q9BYE0 225 aa12.57□□□□□ -0.4
SCARB2-221ENST00000640341 RP1L1Q8IWN7 2480 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-221ENST00000640341 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 RAB5AP20339 215 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 SPATA46Q5T0L3 261 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 HLA-CQ95604 372 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 BOD1Q96IK1 185 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 LOC102723996A0A087X1L8 192 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF732B4DXR9 585 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
SCARB2-221ENST00000640341 CA11O75493 328 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 DYNLT3P51808 116 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 PRDX4Q13162 271 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 IL13RA2Q14627 380 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 GPR157Q5UAW9 335 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 TMED3Q9Y3Q3 217 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 DSPP15924 2871 aaKnown RBP12.56□□□□□ -0.4
SCARB2-221ENST00000640341 OR2C1O95371 312 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 SRD5A2P31213 254 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 Q0VFX4 171 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 COL19A1Q14993 1142 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 ACER2Q5QJU3 275 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 CPNE4Q96A23 557 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-221ENST00000640341 GINS3Q9BRX5 216 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 POMT1Q9Y6A1 747 aa12.56□□□□□ -0.4
SCARB2-221ENST00000640341 H0YL77 283 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 CHST1O43916 411 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 PDZD11Q5EBL8 140 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 TRIM61Q5EBN2 209 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF343Q6P1L6 599 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 DECR2Q9NUI1 292 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 SYNGR1O43759 233 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 CNOT4O95628 575 aaKnown RBP12.55□□□□□ -0.4
SCARB2-221ENST00000640341 CYB561P49447 251 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 B3GALT5-AS1P59052 145 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM267Q0VDI3 215 aaPredicted RBP12.55□□□□□ -0.4
SCARB2-221ENST00000640341 TUSC5Q8IXB3 177 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF561Q8N587 486 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM252Q8N6L7 170 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 M1APQ8TC57 530 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 PCBD1P61457 104 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 B2MP61769 119 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 OR1J1Q8NGS3 322 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 SGCZQ96LD1 299 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 GLRX2Q9NS18 164 aa12.55□□□□□ -0.4
SCARB2-221ENST00000640341 SVILO95425 2214 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 IFNA4P05014 189 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF266Q14584 549 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 LINC00696Q6ZRV3 163 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 HIST1H2AAQ96QV6 131 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 ZFHX4Q86UP3 3567 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 TRAPPC2LH3BP13 241 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
SCARB2-221ENST00000640341 HMGN3Q15651 99 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF552Q9H707 407 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-221ENST00000640341 PLA2G3Q9NZ20 509 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 PILRBQ9UKJ0 227 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
SCARB2-221ENST00000640341 TRAV20A0A0B4J274 112 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 HSPA12AO43301 675 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM50AO95807 157 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 IAPPP10997 89 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 HPSE2Q8WWQ2 592 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 ADAMTS20P59510 1910 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms