RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SHANK3Q9BYB0 1731 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 EML5Q05BV3 1969 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 COL22A1Q8NFW1 1626 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 LOC285095A0A1B0GVY8 99 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 MANSC4A6NHS7 340 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 SMIM22K7EJ46 135 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PAGE4O60829 102 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 LIMS3P0CW19 117 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 LIMS4P0CW20 117 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 DUSP2Q05923 314 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 HLA-BQ31612 363 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 AMMECR1LQ6DCA0 310 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 CDC42EP5Q6NZY7 148 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM219Q86XT9 240 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF695Q8IW36 515 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 STHQ8IWL8 128 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 C8orf31Q8N9H6 132 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GGTLC1Q9BX51 225 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GPR35Q9HC97 309 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TAS2R5Q9NYW4 299 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 SETBP1Q9Y6X0 1596 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 MYO3AQ8NEV4 1616 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TEX22C9J3V5 150 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PRSS23O95084 383 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ZXDAP98168 799 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 GINS1Q14691 196 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 CRB2Q5IJ48 1285 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 LYSMD4Q5XG99 296 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ADAMTSL5Q6ZMM2 481 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF66Q6ZN08 573 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TBC1D26Q86UD7 250 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 OR5AR1Q8NGP9 310 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 WIPF2Q8TF74 440 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 PGLYRP2Q96PD5 576 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 SLC25A33Q9BSK2 321 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 ABHD6Q9BV23 337 aa3.78□□□□□ -1.8
SCN3A-209ENST00000639244 XRN1Q8IZH2 1706 aaKnown RBP3.78□□□□□ -1.8
SCN3A-209ENST00000639244 TINCRA0A1B0GVN0 87 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 MPDU1O75352 247 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 DHRS3O75911 302 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 CD160O95971 181 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 PRDX3P30048 256 aaKnown RBP3.78□□□□□ -1.81
SCN3A-209ENST00000639244 SLC35A1P78382 337 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 PSG4Q00888 419 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 ZP4Q12836 540 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 SIX1Q15475 284 aaPredicted RBP3.78□□□□□ -1.81
SCN3A-209ENST00000639244 RPEL1Q2QD12 228 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 OR10J3Q5JRS4 329 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 MIIPQ5JXC2 388 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 SBSNQ6UWP8 590 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM174Q8WUU8 243 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 TIMD4Q96H15 378 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 RASL11BQ9BPW5 248 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 GPR84Q9NQS5 396 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM106BQ9NUM4 274 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 MRPL27Q9P0M9 148 aaKnown RBP3.78□□□□□ -1.81
SCN3A-209ENST00000639244 FOXA2Q9Y261 457 aaPredicted RBP3.78□□□□□ -1.81
SCN3A-209ENST00000639244 HS3ST2Q9Y278 367 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 BTRCQ9Y297 605 aa3.78□□□□□ -1.81
SCN3A-209ENST00000639244 MAP3K4Q9Y6R4 1608 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 FAM220BPB1ANY3 271 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM233B4DJY2 109 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM262E9PQX1 116 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 TNFRSF10CO14798 259 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 FAM106CPP0CH98 169 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 PVRP15151 417 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SIRPAP78324 504 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 EXOSC7Q15024 291 aaKnown RBP3.77□□□□□ -1.81
SCN3A-209ENST00000639244 CDKN3Q16667 212 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 FAM106AQ4KMX7 169 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 CXorf66Q5JRM2 361 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SLC18B1Q6NT16 456 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 RCHY1Q96PM5 261 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 ATF6BQ99941 703 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 RNF181Q9P0P0 153 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 STRCQ7RTU9 1775 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SIRPB1O00241 398 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 TAPBPO15533 448 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 FCGR3BO75015 233 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 ORM2P19652 201 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 PSMB4P28070 264 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SNRPNP63162 240 aaKnown RBP3.77□□□□□ -1.81
SCN3A-209ENST00000639244 EFEMP1Q12805 493 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 MELKQ14680 651 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 MDGA2Q7Z553 956 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 OR5AK2Q8NH90 309 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 MZB1Q8WU39 189 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SLC25A21Q9BQT8 299 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-209ENST00000639244 C1orf123Q9NWV4 160 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 EHFQ9NZC4 300 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 IDSB3KWA1 339 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 IDSP22304 550 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 FOXG1P55316 489 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-209ENST00000639244 TGIF1Q15583 401 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 VWC2Q2TAL6 325 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SSX8Q7RTT4 187 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 SLC35F2Q8IXU6 374 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 OSR2Q8N2R0 312 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 ZDHHC22Q8N966 263 aa3.77□□□□□ -1.81
SCN3A-209ENST00000639244 ADAD2Q8NCV1 583 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms