RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 COMMD1Q8N668 190 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 TPRX1Q8N7U7 411 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 OR52N4Q8NGI2 321 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 TRMT10AQ8TBZ6 339 aaKnown RBP4.35□□□□□ -1.71
PDE4D-229ENST00000638939 CHPT1Q8WUD6 406 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 PP6455Q8WZ26 134 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 CORO2AQ92828 525 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 CCDC124Q96CT7 223 aaKnown RBP4.35□□□□□ -1.71
PDE4D-229ENST00000638939 BORCS8Q96FH0 119 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 P2RX4Q99571 388 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 APOL4Q9BPW4 351 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 CHID1Q9BWS9 393 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 CHST6Q9GZX3 395 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 COMMD4Q9H0A8 199 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 RHOFQ9HBH0 211 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
PDE4D-229ENST00000638939 ZFP57Q9NU63 452 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 RBFOX1Q9NWB1 397 aaKnown RBP4.35□□□□□ -1.71
PDE4D-229ENST00000638939 IL36RNQ9UBH0 155 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 GLS2Q9UI32 602 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 MRM2Q9UI43 246 aaKnown RBP4.35□□□□□ -1.71
PDE4D-229ENST00000638939 AMMECR1Q9Y4X0 333 aaPredicted RBP4.35□□□□□ -1.71
PDE4D-229ENST00000638939 U3KQK5 164 aa4.35□□□□□ -1.71
PDE4D-229ENST00000638939 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
PDE4D-229ENST00000638939 LOC107986453A0A1B0GWG9 222 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 ODAMA1E959 279 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FUOMA2VDF0 154 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A18PA6NE21 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A16PA6NEW6 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A20PA6NIJ5 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 A6NIN4 97 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A9PA6NNJ1 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A12PA8MX19 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A5PA8MXJ8 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 ZNF670-ZNF695F2Z2N8 137 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 GNGT2O14610 69 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FGF16O43320 207 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 SYT7O43581 403 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 RAMP3O60896 148 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 SULT1C4O75897 302 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CYB5AP00167 134 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 SERPINA3P01011 423 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 KRT8P05787 483 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A15PP0C7V4 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A13PP0C7W8 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A14PP0C7W9 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM90A24PP0C7X0 464 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM106CPP0CH98 169 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 PRKACAP17612 351 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 BCL3P20749 454 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CALB2P22676 271 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CDK2P24941 298 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CD24P25063 80 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 LMO1P25800 156 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 MYCNOSP40205 109 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 OR3A4PP47883 348 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 NPBWR2P48146 333 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 RBP2P50120 134 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CRISP1P54107 249 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 RAP2BP61225 183 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 ISL1P61371 349 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 DGCR2P98153 550 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 EFNB1P98172 346 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 PAX5Q02548 391 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 AADACL4Q5VUY2 407 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 UNQ9370/PRO34162Q6UXP9 181 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 BAIAP2L2Q6UXY1 529 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 PLEKHG7Q6ZR37 379 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 UTS2BQ765I0 119 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 MEPCEQ7L2J0 689 aaKnown RBP4.34□□□□□ -1.71
PDE4D-229ENST00000638939 SSX6Q7RTT6 188 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 RNF144BQ7Z419 303 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CATSPERDQ86XM0 798 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 EGFL6Q8IUX8 553 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 FAM58AQ8N1B3 248 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 C5orf56Q8N8D9 126 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CHST4Q8NCG5 386 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 KLHL30-AS1Q8NEE0 82 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 BCAS4Q8TDM0 211 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 CANT1Q8WVQ1 401 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 TFAP2CQ92754 450 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 SPSB1Q96BD6 273 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 NRBF2Q96F24 287 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 ZNF649Q9BS31 505 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 SLC25A32Q9H2D1 315 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 ZNF286AQ9HBT8 521 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 HMG20AQ9NP66 347 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 TVP23BQ9NYZ1 205 aa4.34□□□□□ -1.71
PDE4D-229ENST00000638939 A0A1W2PPI3 338 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 A0A1W2PQL4 384 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-229ENST00000638939 TCRBV3S1A0A5B6 114 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 ZNF729A6NN14 1252 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-229ENST00000638939 ZAR1LA6NP61 321 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 C3orf84H3BNL1 204 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 M0R129 80 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 SIRPB1O00241 398 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 SH2D1BO14796 132 aa4.33□□□□□ -1.72
PDE4D-229ENST00000638939 MAGEB4O15481 346 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-229ENST00000638939 FKBP6O75344 327 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms