RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SERPINA12Q8IW75 414 aa13.41□□□□□ -0.26
SMN2-216ENST00000638794 SYS1Q8N2H4 156 aa13.41□□□□□ -0.26
SMN2-216ENST00000638794 PARP16Q8N5Y8 322 aa13.41□□□□□ -0.26
SMN2-216ENST00000638794 OR51T1Q8NGJ9 327 aa13.41□□□□□ -0.26
SMN2-216ENST00000638794 OR5D14Q8NGL3 314 aa13.41□□□□□ -0.26
SMN2-216ENST00000638794 MRPL48Q96GC5 212 aaKnown RBP13.41□□□□□ -0.26
SMN2-216ENST00000638794 H3BNX3 289 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 M0QZK8 103 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 CGB3P0DN86 165 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 CGB7P0DN87 165 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 DBTP11182 482 aaKnown RBP13.4□□□□□ -0.26
SMN2-216ENST00000638794 GABRB1P18505 474 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 ZNF691Q5VV52 312 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 OR13A1Q8NGR1 328 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 OR9G1Q8NH87 305 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 RPEQ96AT9 228 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 NR1H4Q96RI1 486 aaPredicted RBP13.4□□□□□ -0.26
SMN2-216ENST00000638794 PDCD1LG2Q9BQ51 273 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 ZNF649Q9BS31 505 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 KIF25Q9UIL4 384 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 MOB4Q9Y3A3 225 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
SMN2-216ENST00000638794 MEIKINA0A087WXM9 373 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 TRAV24A0A0B4J272 114 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A18PA6NE21 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A16PA6NEW6 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A20PA6NIJ5 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 TMEM212A6NML5 194 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A9PA6NNJ1 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A12PA8MX19 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A5PA8MXJ8 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 E9PI62 339 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 IGHV3-7P01780 117 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A15PP0C7V4 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A13PP0C7W8 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A14PP0C7W9 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM90A24PP0C7X0 464 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 FAM106CPP0CH98 169 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 PAN3Q58A45 887 aaKnown RBP13.39□□□□□ -0.27
SMN2-216ENST00000638794 ELP2Q6IA86 826 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 OSR2Q8N2R0 312 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 CBR4Q8N4T8 237 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 ZNF565Q8N9K5 539 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 OR56B4Q8NH76 319 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 OR5AK2Q8NH90 309 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 TSEN15Q8WW01 171 aaKnown RBP13.39□□□□□ -0.27
SMN2-216ENST00000638794 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 TOMM40LQ969M1 308 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 RCC1LQ96I51 464 aaKnown RBP13.39□□□□□ -0.27
SMN2-216ENST00000638794 MYCBPQ99417 103 aaPredicted RBP13.39□□□□□ -0.27
SMN2-216ENST00000638794 AMBNQ9NP70 447 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 INPP5EQ9NRR6 644 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 CALYQ9NYX4 217 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 DHDHQ9UQ10 334 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 GMPPBQ9Y5P6 360 aa13.39□□□□□ -0.27
SMN2-216ENST00000638794 J3QR06 171 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 K7EIL1 84 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
SMN2-216ENST00000638794 RPSAP08865 295 aaKnown RBP13.38□□□□□ -0.27
SMN2-216ENST00000638794 PXT1Q8NFP0 134 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 OR51A2Q8NGJ7 313 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 PCDHB16Q9NRJ7 776 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 ERVK13-1Q9NX77 482 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 IDI2-AS1Q9NZ38 188 aa13.38□□□□□ -0.27
SMN2-216ENST00000638794 AMMECR1Q9Y4X0 333 aaPredicted RBP13.38□□□□□ -0.27
SMN2-216ENST00000638794 KMT2CQ8NEZ4 4911 aaKnown RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 A0A1W2PPI3 338 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 PSMB11A5LHX3 300 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 GABRPO00591 440 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 FADS2O95864 444 aaKnown RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 IL1AP01583 271 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 CCDC159P0C7I6 412 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 KRTAP10-11P60412 298 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 MRPL28Q13084 256 aaKnown RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 DIAPH2-AS1Q14236 149 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 IL13RA2Q14627 380 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 LTC4SQ16873 150 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 PIGYQ3MUY2 71 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 RSBN1Q5VWQ0 802 aaPredicted RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 ZNF529Q6P280 563 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 ZNF329Q86UD4 541 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 SATL1Q86VE3 508 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 THNSL2Q86YJ6 484 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 DRAM1Q8N682 238 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 OR10K1Q8NGX5 313 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 PLPPR1Q8TBJ4 325 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 MRGPRDQ8TDS7 321 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 TNFAIP8L1Q8WVP5 186 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 RGP1Q92546 391 aaPredicted RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 CPNE2Q96FN4 548 aaPredicted RBP13.37□□□□□ -0.27
SMN2-216ENST00000638794 GPER1Q99527 375 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 BARHL1Q9BZE3 327 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 NCOR1P1Q9H4R4 102 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 LINC00574Q9H8X3 128 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 PSG11Q9UQ72 335 aa13.37□□□□□ -0.27
SMN2-216ENST00000638794 NPIPB11E5RHQ5 1161 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms