RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PFDN5Q99471 154 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM38BQ9NVV0 291 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 GAR1Q9NY12 217 aaKnown RBP9.4□□□□□ -0.9
SNIP1-204ENST00000638725 IL36GQ9NZH8 169 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 IGKV1D-13A0A0B4J2D9 117 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 IGHV5-10-1A0A0J9YXX1 117 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 OR6C6A6NF89 314 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF587BE7ETH6 402 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BKO60814 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HSPB1P04792 205 aaKnown RBP9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BJP06899 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 CST2P09228 141 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 IGKV1-13P0DP09 117 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BOP23527 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BBP33778 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BDP58876 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BCP62807 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 CCL7P80098 99 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST2H2BEQ16778 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 PDZD11Q5EBL8 140 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.4□□□□□ -0.91
SNIP1-204ENST00000638725 AKR1C8PQ5T2L2 129 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 GFI1BQ5VTD9 330 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 GAPTQ8N292 157 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF611Q8N823 705 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF383Q8NA42 475 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 CLDND2Q8NHS1 167 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 EXTL1Q92935 676 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BHQ93079 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 TVP23CQ96ET8 276 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BNQ99877 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 HIST1H2BMQ99879 126 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 PCED1AQ9H1Q7 454 aa9.4□□□□□ -0.91
SNIP1-204ENST00000638725 CYB5BO43169 146 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
SNIP1-204ENST00000638725 TRGC2P03986 189 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 SCTP09683 121 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 SRFP11831 508 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 RPL23AP62750 156 aaKnown RBP9.39□□□□□ -0.91
SNIP1-204ENST00000638725 MRPL14Q6P1L8 145 aaKnown RBP9.39□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF600Q6ZNG1 722 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 CMTM1Q8IZ96 169 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 FAM185AQ8N0U4 392 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 CCDC74BQ96LY2 380 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 CALHM2Q9HA72 323 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 TREM2Q9NZC2 230 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 ZNHIT1O43257 154 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 NMSQ5H8A3 153 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 PLPPR1Q8TBJ4 325 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 GNPNAT1Q96EK6 184 aaPredicted RBP9.39□□□□□ -0.91
SNIP1-204ENST00000638725 WNT5BQ9H1J7 359 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 OCIAD1Q9NX40 245 aa9.39□□□□□ -0.91
SNIP1-204ENST00000638725 KIAA1549Q9HCM3 1950 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 RPL36A-HNRNPH2H7BZ11 118 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 HSPB6O14558 160 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 CHST1O43916 411 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 SOD3P08294 240 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 EDN3P14138 238 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 LBX1P52954 281 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 RAC1P63000 192 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 ID3Q02535 119 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 HERPUD1Q15011 391 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 GPR61Q9BZJ8 451 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 PARPBPQ9NWS1 579 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 PTRH2Q9Y3E5 179 aaKnown RBP9.38□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF816-ZNF321PA0A0X1KG74 233 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 SLC22A20A6NK97 555 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 H3BP45 60 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 TNFSF12O43508 249 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 GLIPR1P48060 266 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 PAX9P55771 341 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 KRTAP27-1Q3LI81 207 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 WDR5BQ86VZ2 330 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 FOXB1Q99853 325 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 OR2H1Q9GZK4 316 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 CCL28Q9NRJ3 127 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
SNIP1-204ENST00000638725 YKT6O15498 198 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 LY86O95711 162 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 TK1P04183 234 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 KLK3P07288 261 aaPredicted RBP9.37□□□□□ -0.91
SNIP1-204ENST00000638725 BCL3P20749 454 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 BAXQ07812 192 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 CEACAM16Q2WEN9 425 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 YRDCQ86U90 279 aaKnown RBP9.37□□□□□ -0.91
SNIP1-204ENST00000638725 Q9N2K0 584 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 SIRT7Q9NRC8 400 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 IL36RNQ9UBH0 155 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 TCFL5Q9UL49 500 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 IGHV1-45A0A0A0MS14 117 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 A0A0G2JRQ6 117 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 SEC14L6B5MCN3 397 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 JMJD7P0C870 316 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 CEACAM1P13688 526 aa9.37□□□□□ -0.91
SNIP1-204ENST00000638725 VDAC1P21796 283 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms