RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CXXC4Q9H2H0 198 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 PNLIPP16233 465 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 CADM4Q8NFZ8 388 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 RPLP1P05386 114 aaKnown RBP16.26■□□□□ 0.19
SCARB2-213ENST00000638680 PMELP40967 661 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 TIPARPQ7Z3E1 657 aaKnown RBP16.26■□□□□ 0.19
SCARB2-213ENST00000638680 PDPNQ86YL7 162 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 SSMEM1Q8WWF3 244 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 SCN1AP35498 2009 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 NANOS3P60323 173 aaKnown RBP16.26■□□□□ 0.19
SCARB2-213ENST00000638680 KLHDC2Q9Y2U9 406 aa16.26■□□□□ 0.19
SCARB2-213ENST00000638680 CYR61O00622 381 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 CIDEAO60543 219 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 WISP3O95389 354 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-213ENST00000638680 COL19A1Q14993 1142 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 HIST3H3Q16695 136 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 C10orf35Q96D05 121 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 M0QZK8 103 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 GGCTO75223 188 aaKnown RBP16.25■□□□□ 0.19
SCARB2-213ENST00000638680 SEC11BP0C7V7 166 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 GUCA2BQ16661 112 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 OVCH2Q7RTZ1 564 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 OR4S2Q8NH73 311 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 ADAT3Q96EY9 351 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-213ENST00000638680 GAL3ST2Q9H3Q3 398 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 WASHC3Q9Y3C0 194 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 SIGLEC5O15389 551 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 B2MP61769 119 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 SIGLEC14Q08ET2 396 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 HYAL1Q12794 435 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 ISXQ2M1V0 245 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 MRPL54Q6P161 138 aaKnown RBP16.25■□□□□ 0.19
SCARB2-213ENST00000638680 SLC35E3Q7Z769 313 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 MRGPRGQ86SM5 289 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 TMEM191AQ9H0A3 160 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 SEBOXQ9HB31 216 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-213ENST00000638680 MRPS18BQ9Y676 258 aaKnown RBP16.25■□□□□ 0.19
SCARB2-213ENST00000638680 UBE2V2Q15819 145 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 DPF1Q92782 380 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 RNF2Q99496 336 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 CLEC5AQ9NY25 188 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 TMEM50BP56557 158 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 MRGPRFQ96AM1 343 aa16.25■□□□□ 0.19
SCARB2-213ENST00000638680 G6PCP35575 357 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 ELOVL1Q9BW60 279 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 CENPVL1A0A0U1RR11 272 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 FOXO1Q12778 655 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 RNF133Q8WVZ7 376 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 GHITMQ9H3K2 345 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 NAGKQ9UJ70 344 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 OOEPA6NGQ2 149 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 TNFAIP6P98066 277 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-213ENST00000638680 RCC2Q9P258 522 aaKnown RBP16.24■□□□□ 0.19
SCARB2-213ENST00000638680 MUC1P15941 1255 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-213ENST00000638680 ATP6V0CP27449 155 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 C21orf62-AS1Q17RA5 79 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 ZNF260Q3ZCT1 412 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 FAM74A3Q4VXF1 159 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 LBHQ53QV2 105 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-213ENST00000638680 ZNF784Q8NCA9 323 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-213ENST00000638680 OR1K1Q8NGR3 316 aa16.24■□□□□ 0.19
SCARB2-213ENST00000638680 HDHD3Q9BSH5 251 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-213ENST00000638680 F5H697 171 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 RAC3P60763 192 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 TRA2AQ13595 282 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCARB2-213ENST00000638680 AURKAIP1Q9NWT8 199 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-213ENST00000638680 M0QZ24 198 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 PDE6DO43924 150 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 PTP4A3O75365 173 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 SRSF10O75494 262 aaKnown RBP16.23■□□□□ 0.19
SCARB2-213ENST00000638680 PCED1AQ9H1Q7 454 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 ERVH48-1M5A8F1 160 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 SEMA7AO75326 666 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 KIR3DL2P43630 455 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 GGTLC2Q14390 218 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 CCL17Q92583 94 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 IL17BQ9UHF5 180 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 hADV38S2A0JD32 116 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 K7ESF4 209 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 CDS2O95674 445 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 HAND1O96004 215 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 IER3P46695 156 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 TMEM211Q6ICI0 200 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 HOGA1Q86XE5 327 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 STARD4Q96DR4 205 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 MAP1LC3CQ9BXW4 147 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 OR2M5A3KFT3 312 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 NMBP08949 121 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 NSUN5P2Q63ZY6 315 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 OR6C3Q9NZP0 311 aa16.23■□□□□ 0.19
SCARB2-213ENST00000638680 SNCGO76070 127 aa16.22■□□□□ 0.19
SCARB2-213ENST00000638680 MRPS11P82912 194 aaKnown RBP16.22■□□□□ 0.19
SCARB2-213ENST00000638680 RPL24P83731 157 aaKnown RBP16.22■□□□□ 0.19
SCARB2-213ENST00000638680 GFRALQ6UXV0 394 aa16.22■□□□□ 0.19
SCARB2-213ENST00000638680 C16orf82Q7Z2V1 217 aa16.22■□□□□ 0.19
SCARB2-213ENST00000638680 NRIP2Q9BQI9 281 aa16.22■□□□□ 0.19
SCARB2-213ENST00000638680 PRSS1P07477 247 aa16.22■□□□□ 0.19
SCARB2-213ENST00000638680 PSG2P11465 335 aa16.22■□□□□ 0.19
SCARB2-213ENST00000638680 KLF3P57682 345 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms