RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 C15orf39Q6ZRI6 1047 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 TMEM262E9PQX1 116 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 ZNF77Q15935 545 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 MPV17LQ2QL34 196 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 NFAM1Q8NET5 270 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 FCGR3BO75015 233 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 ZNF735P0CB33 412 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 MEF2CQ06413 473 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 MRPL58Q14197 206 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 MOGAT3Q86VF5 341 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 CA13Q8N1Q1 262 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 MBNL1Q9NR56 388 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 A0A1W2PQM1 296 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 ABLIM3O94929 683 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 NGFP01138 241 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 PPICP45877 212 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 ZG16BQ96DA0 208 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 CXorf65A6NEN9 183 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 WNT9BO14905 357 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 PPIHO43447 177 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 OR5AC1P0C628 307 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 SLC25A1P53007 311 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 SLC25A34Q6PIV7 304 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 CLEC2LP0C7M8 214 aa17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 CICQ96RK0 1608 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-257ENST00000638009 HLA-DRB1P01911 266 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 FGF13Q92913 245 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 FAM221AA4D161 298 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 ZNF740Q8NDX6 193 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 MARVELD1Q9BSK0 173 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 TRAV38-1A0A0B4J264 116 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 A0A0B4J293 547 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 FRG2CA6NGY1 282 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 F2RL2O00254 374 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 CCDC144NLQ6NUI1 221 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 KIR2DL4Q99706 377 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 EML5Q05BV3 1969 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 A0A096LPE4 126 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 A0A1W2PPZ6 126 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 HIST1H1DP16402 221 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 KISS1Q15726 138 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 PLPP1O14494 284 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 COMPP49747 757 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 PSG5Q15238 335 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 DEGS2Q6QHC5 323 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 TEPPQ6URK8 271 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 TRILQ7L0X0 811 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 OR10J6PQ8NGY7 276 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 HINT3Q9NQE9 182 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 MTFP1Q9UDX5 166 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 A0A1W2PS18 150 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 PMELP40967 661 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 OR4C13Q8NGP0 309 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 MEGF10Q96KG7 1140 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 CRISPLD2Q9H0B8 497 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 HCRTO43612 131 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 ZNF441Q8N8Z8 693 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 OR4C3Q8NH37 302 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 KLK11Q9UBX7 282 aa17.25■□□□□ 0.35
CACNA1A-257ENST00000638009 TRDCB7Z8K6 153 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 RELQ04864 619 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 OR4A8P0C604 315 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 HTN1P15515 57 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 IER3P46695 156 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 TMEM33P57088 247 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 DUSP2Q05923 314 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 FAHD1Q6P587 224 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 OR10V1Q8NGI7 309 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 TXNRD2Q9NNW7 524 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 EBLN2Q6P2I7 272 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 SIRT6Q8N6T7 355 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 CNTD2Q9H8S5 307 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 PRDX2P32119 198 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 RBM45Q8IUH3 476 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 RNF133Q8WVZ7 376 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 FBXL6Q8N531 539 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 OR4P4Q8NGL7 312 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 LSM10Q969L4 123 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 DNAJB12Q9NXW2 375 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 A0A1B0GU03 582 aa17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 MBLAC1A4D2B0 266 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 CTSDP07339 412 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 FGF8P55075 233 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-257ENST00000638009 TMEM250H0YL14 139 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 H1FOOQ8IZA3 346 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 LRRTM3Q86VH5 581 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 ZBTB34Q8NCN2 500 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 RAB1CQ92928 201 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 AKIP1Q9NQ31 210 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 SFT2D2O95562 160 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 FAAP20Q6NZ36 180 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 OTOSQ8NHW6 89 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 ERRFI1Q9UJM3 462 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 C17orf51A8MQB3 221 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 VDAC1P21796 283 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 METTL26Q96S19 204 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 IDSB3KWA1 339 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 HRO43593 1189 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms