RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FAM90A20PA6NIJ5 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A9PA6NNJ1 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A12PA8MX19 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A5PA8MXJ8 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 H3BNX3 289 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 M0QZK8 103 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 ZFPL1O95159 310 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A15PP0C7V4 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A13PP0C7W8 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A14PP0C7W9 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A24PP0C7X0 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 NFYBP25208 207 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 MNDAP41218 407 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 MTNR1BP49286 362 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 RBM39Q14498 530 aaKnown RBP14.69□□□□□ -0.06
CLN6-220ENST00000637450 ZNF691Q5VV52 312 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 THNSL2Q86YJ6 484 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 ZNF565Q8N9K5 539 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 OR4X2Q8NGF9 303 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 OR9G1Q8NH87 305 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 KIRREL1Q96J84 757 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 TMEM212A6NML5 194 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 E9PI62 339 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 H0YJX3 145 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 PF4P02776 101 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 FAM106CPP0CH98 169 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 CBR4Q8N4T8 237 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 PXT1Q8NFP0 134 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 OR5AK2Q8NH90 309 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 RHOXF1Q8NHV9 184 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 CNIH3Q8TBE1 160 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 NR1H4Q96RI1 486 aaPredicted RBP14.68□□□□□ -0.06
CLN6-220ENST00000637450 PDCD1LG2Q9BQ51 273 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 LINC00574Q9H8X3 128 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 ERVK13-1Q9NX77 482 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 DHDHQ9UQ10 334 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 GMPPBQ9Y5P6 360 aa14.68□□□□□ -0.06
CLN6-220ENST00000637450 TRAV24A0A0B4J272 114 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 J3QR06 171 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 FADS2O95864 444 aaKnown RBP14.67□□□□□ -0.06
CLN6-220ENST00000637450 C21orf33P30042 268 aaPredicted RBP14.67□□□□□ -0.06
CLN6-220ENST00000637450 SLC35A2P78381 396 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 MRPL28Q13084 256 aaKnown RBP14.67□□□□□ -0.06
CLN6-220ENST00000637450 PAN3Q58A45 887 aaKnown RBP14.67□□□□□ -0.06
CLN6-220ENST00000637450 C9orf152Q5JTZ5 239 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 ZNF529Q6P280 563 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 OSR2Q8N2R0 312 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 OR13A1Q8NGR1 328 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 RCC1LQ96I51 464 aaKnown RBP14.67□□□□□ -0.06
CLN6-220ENST00000637450 BARHL1Q9BZE3 327 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 AMBNQ9NP70 447 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 PCDHB16Q9NRJ7 776 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 INPP5EQ9NRR6 644 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 CALYQ9NYX4 217 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 KIF25Q9UIL4 384 aa14.67□□□□□ -0.06
CLN6-220ENST00000637450 MEIKINA0A087WXM9 373 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 HSPB6O14558 160 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 MPIG6BO95866 241 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 CCDC159P0C7I6 412 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 GLP1RP43220 463 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 PAX5Q02548 391 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 RAB40BQ12829 278 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 IL13RA2Q14627 380 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 ZFP1Q6P2D0 407 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 Q8NFD4 153 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 TOMM40LQ969M1 308 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 RPEQ96AT9 228 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 Q96MT0 163 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 IDI2-AS1Q9NZ38 188 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 PSG11Q9UQ72 335 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 MOB4Q9Y3A3 225 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 AMMECR1Q9Y4X0 333 aaPredicted RBP14.66□□□□□ -0.06
CLN6-220ENST00000637450 HSPE1-MOB4S4R3N1 261 aa14.66□□□□□ -0.06
CLN6-220ENST00000637450 NPIPB11E5RHQ5 1161 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 MPZL2O60487 215 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 DUS4LO95620 317 aaKnown RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 IL1AP01583 271 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 SNRNP70P08621 437 aaKnown RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 RAB3AP20336 220 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 GBX2P52951 348 aaPredicted RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 ZSCAN26Q16670 478 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 RSBN1Q5VWQ0 802 aaPredicted RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 LPCAT4Q643R3 524 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 ASCL4Q6XD76 172 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 TNFAIP8L1Q8WVP5 186 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 TSEN15Q8WW01 171 aaKnown RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 LEAP2Q969E1 77 aa14.65□□□□□ -0.06
CLN6-220ENST00000637450 CPNE2Q96FN4 548 aaPredicted RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 MRPS18AQ9NVS2 196 aaKnown RBP14.65□□□□□ -0.06
CLN6-220ENST00000637450 PSMB11A5LHX3 300 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 K7EIL1 84 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 GABRPO00591 440 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 MAGEB3O15480 346 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 IGHV3-7P01780 117 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 KCNJ3P48549 501 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 KRTAP10-11P60412 298 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 DIAPH2-AS1Q14236 149 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 KHDC1LQ5JSQ8 128 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 SLC16A12Q6ZSM3 486 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 SATL1Q86VE3 508 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms