RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CBLN4Q9NTU7 201 aa12.9□□□□□ -0.34
CLN6-219ENST00000637329 CHD3Q12873 2000 aaKnown RBP12.89□□□□□ -0.35
CLN6-219ENST00000637329 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
CLN6-219ENST00000637329 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 OR2AT4A6NND4 320 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 C19orf84I3L1E1 186 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 PRAF2O60831 178 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 PEX14O75381 377 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 H2AFB2P0C5Z0 115 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 MUC1P15941 1255 aaPredicted RBP12.89□□□□□ -0.35
CLN6-219ENST00000637329 KIR2DS4P43632 304 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 OR3A3P47888 321 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 MECP2P51608 486 aaKnown RBP12.89□□□□□ -0.35
CLN6-219ENST00000637329 GMFBP60983 142 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 CCL8P80075 99 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 KIR2DS1Q14954 304 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 CDK10Q15131 360 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 AGAP6Q5VW22 663 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 TEX36Q5VZQ5 186 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 ZNF880Q6PDB4 577 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 ZNF497Q6ZNH5 498 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 DTX2Q86UW9 622 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 MRPL30Q8TCC3 161 aaKnown RBP12.89□□□□□ -0.35
CLN6-219ENST00000637329 DYRK2Q92630 601 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 RDH5Q92781 318 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 CYYR1Q96J86 154 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 GINS4Q9BRT9 223 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 TMEM165Q9HC07 324 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 NECAP2Q9NVZ3 263 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 OR14J1Q9UGF5 321 aa12.89□□□□□ -0.35
CLN6-219ENST00000637329 ZNF230Q9UIE0 474 aaPredicted RBP12.89□□□□□ -0.35
CLN6-219ENST00000637329 A6NNC1 897 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 HSPB6O14558 160 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 FCER2P06734 321 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 PSG2P11465 335 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 ECI1P42126 302 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 GRK1Q15835 563 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 C11orf71Q6IPW1 123 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 MEX3BQ6ZN04 569 aaKnown RBP12.88□□□□□ -0.35
CLN6-219ENST00000637329 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 SLC6A7Q99884 636 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 PPA2Q9H2U2 334 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 Q9N2K0 584 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 EHFQ9NZC4 300 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 TANC2Q9HCD6 1990 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 POLQO75417 2590 aa12.88□□□□□ -0.35
CLN6-219ENST00000637329 IGKV1D-17A0A075B6S4 117 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 TMEM30CPA0ZSE6 113 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 C7orf66A4D0T2 115 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 OOEPA6NGQ2 149 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 RFPL4AA6NLU0 287 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 CEACAM18A8MTB9 384 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 RFPL4AL1F8VTS6 287 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 DIRAS3O95661 229 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 PMP2P02689 132 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 PRDX2P32119 198 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 CD80P33681 288 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 COL10A1Q03692 680 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 KRTAP21-3Q3LHN1 58 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 STUMQ69YW2 141 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 SLC35E4Q6ICL7 350 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 CADM3Q8N126 398 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 ZDHHC22Q8N966 263 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 MAFIPQ8WZ33 124 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 SPOCK3Q9BQ16 436 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 DNTTIP1Q9H147 329 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 ITPR3Q14573 2671 aa12.87□□□□□ -0.35
CLN6-219ENST00000637329 TRAV6A0A075B6T7 132 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 A0A0B4J293 547 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 IGHV1-69-2A0A0G2JMI3 117 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 FAM221AA4D161 298 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 PSPNO60542 156 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 ZNF737O75373 536 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 FSTL3O95633 263 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 CTXN2P0C2S0 81 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 DANCRP0C864 163 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 TRAPPC2P0DI81 140 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 TRAPPC2BP0DI82 140 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 OR3A1P47881 315 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 CEBPDP49716 269 aaPredicted RBP12.86□□□□□ -0.35
CLN6-219ENST00000637329 HLA-DRB3P79483 266 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
CLN6-219ENST00000637329 SCGB2B2Q4G0G5 96 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 Q6ZPA2 131 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 LHFPL1Q86WI0 220 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 ZNF561Q8N587 486 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 ANGPTL6Q8NI99 470 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 PLPPR1Q8TBJ4 325 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 SDSLQ96GA7 329 aa12.86□□□□□ -0.35
CLN6-219ENST00000637329 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
CLN6-219ENST00000637329 MBNL3Q9NUK0 354 aaKnown RBP12.86□□□□□ -0.35
CLN6-219ENST00000637329 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms