RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GCNT2Q8N0V5 402 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 BHLHE23Q8NDY6 225 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 RCC1LQ96I51 464 aaKnown RBP9.95□□□□□ -0.82
CLN6-217ENST00000636964 MMP26Q9NRE1 261 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 GPR173Q9NS66 373 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 ZNF891A8MT65 544 aaPredicted RBP9.95□□□□□ -0.82
CLN6-217ENST00000636964 MPIG6BO95866 241 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 SFTA3P0C7M3 94 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 AKAIN1P0CW23 69 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 PGAM2P15259 253 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 SLC22A6Q4U2R8 563 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 STEAP1BQ6NZ63 245 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 C15orf40Q8WUR7 153 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 ARL11Q969Q4 196 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 PRDM13Q9H4Q3 707 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 RAB22AQ9UL26 194 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 M0QZK8 103 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 RAB27BO00194 218 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 CSF1P09603 554 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 FCGR2AP12318 317 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 PCBD1P61457 104 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 QRFPP83859 136 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 RNPS1Q15287 305 aaKnown RBP9.94□□□□□ -0.82
CLN6-217ENST00000636964 KISS1Q15726 138 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 SCGB2B2Q4G0G5 96 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 PYY3Q5JQD4 70 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 OR13C8Q8NGS7 320 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 ASB13Q8WXK3 278 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 SEH1LQ96EE3 360 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 GSKIPQ9P0R6 139 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 V9GYS6 101 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 DMXL2Q8TDJ6 3036 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 ICE1Q9Y2F5 2266 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 hCG_1809904A0A1W2PP81 198 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 A0A1W2PR64 198 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 A0A1W2PRV1 198 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 ZNF724A8MTY0 619 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 ID4P47928 161 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 PJVKQ0ZLH3 352 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 RTP5Q14D33 572 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 GABRG1Q8N1C3 465 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 SLC30A7Q8NEW0 376 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 EXTL1Q92935 676 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 VPS25Q9BRG1 176 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 METTL8Q9H825 291 aaKnown RBP9.94□□□□□ -0.82
CLN6-217ENST00000636964 ELL3Q9HB65 397 aaPredicted RBP9.94□□□□□ -0.82
CLN6-217ENST00000636964 RHOFQ9HBH0 211 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 MELTFP08582 738 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 GNB3P16520 340 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 CPT2P23786 658 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 FAUP35544 74 aaKnown RBP9.94□□□□□ -0.82
CLN6-217ENST00000636964 ZNF92Q03936 586 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 P4HA3Q7Z4N8 544 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 FAM219AQ8IW50 185 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 C15orf54Q8N8G6 183 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 SEMA6DQ8NFY4 1073 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 HRH4Q9H3N8 390 aa9.94□□□□□ -0.82
CLN6-217ENST00000636964 SPTAN1Q13813 2472 aaKnown RBP9.93□□□□□ -0.82
CLN6-217ENST00000636964 LOC100509620A0A075B734 347 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 TRAV17A0A0B4J275 112 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 MSGN1A6NI15 193 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 TGOLN2O43493 480 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 DAOP14920 347 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 NHLH1Q02575 133 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 SURF2Q15527 256 aaPredicted RBP9.93□□□□□ -0.82
CLN6-217ENST00000636964 HIKESHIQ53FT3 197 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 CRIP3Q6Q6R5 217 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 DHRS11Q6UWP2 260 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 TMEM200AQ86VY9 491 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 GPX8Q8TED1 209 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 RAB24Q969Q5 203 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 KLK13Q9UKR3 277 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 VSIG4Q9Y279 399 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 A0A0B4J2A0 478 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 A0A1W2PPH5 198 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 FAM230AA0A1W2PPH8 454 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 HIST1H1BP16401 226 aaKnown RBP9.93□□□□□ -0.82
CLN6-217ENST00000636964 S100A2P29034 98 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 NKAPLQ5M9Q1 402 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 FAHD2BQ6P2I3 314 aaPredicted RBP9.93□□□□□ -0.82
CLN6-217ENST00000636964 IGFL2Q6UWQ7 119 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 OR4S1Q8NGB4 309 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 NUDCD2Q8WVJ2 157 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 FAHD2AQ96GK7 314 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 C1orf147Q96MC9 270 aaPredicted RBP9.93□□□□□ -0.82
CLN6-217ENST00000636964 TRIB1Q96RU8 372 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
CLN6-217ENST00000636964 A0A0A6YYD4 124 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 C5orf49A4QMS7 147 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 C5orf51A6NDU8 294 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 H0YIZ8 118 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 EREGO14944 169 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 SOCS1O15524 211 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 CSN2P05814 226 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 CD34P28906 385 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 RAB1AP62820 205 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms