RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 FUT3P21217 361 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 LTBRP36941 435 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 NPBWR2P48146 333 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 RAB11AP62491 216 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 MALLQ13021 153 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 ASCL4Q6XD76 172 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 LHFPL2Q6ZUX7 228 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 MAML2Q8IZL2 1156 aaPredicted RBP12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 CARFQ8N187 725 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 GAPTQ8N292 157 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SLC25A31Q9H0C2 315 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SMOC1Q9H4F8 434 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 AKIRIN1Q9H9L7 192 aaPredicted RBP12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SIRT7Q9NRC8 400 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 IGKV1D-13A0A0B4J2D9 117 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 IGKV1-13P0DP09 117 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 GLB1P16278 677 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 RBM11P57052 281 aaKnown RBP12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 ZNF468Q5VIY5 522 aaPredicted RBP12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SLC35E3Q7Z769 313 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 ZIC4Q8N9L1 334 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SNIP1Q8TAD8 396 aaKnown RBP12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 PLPPR1Q8TBJ4 325 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 FAM210BQ96KR6 192 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 SNX22Q96L94 193 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 TMEM56Q96MV1 263 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 TMEM56-RWDD3S4R434 201 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 KIAA1549Q9HCM3 1950 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 ZNF407Q9C0G0 2248 aa12.91□□□□□ -0.34
THUMPD1-206ENST00000636554 ZFP92A6NM28 416 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 SCRG1O75711 98 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 B4GALT1P15291 398 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 EXT1Q16394 746 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 IL22RA1Q8N6P7 574 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 ALKBH3Q96Q83 286 aaPredicted RBP12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 LOC102723971A0A1B0GUV8 181 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 HSPB6O14558 160 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 TNFSF11O14788 317 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 CHST1O43916 411 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 NTF4P34130 210 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 CD200P41217 278 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 RAB35Q15286 201 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 NMSQ5H8A3 153 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 FAM27BQ5VT28 67 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 PLCXD3Q63HM9 321 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 GNPNAT1Q96EK6 184 aaPredicted RBP12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 DEFB126Q9BYW3 111 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 ZNF665Q9H7R5 613 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 TCFL5Q9UL49 500 aa12.9□□□□□ -0.34
THUMPD1-206ENST00000636554 ZNHIT1O43257 154 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 SCTP09683 121 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 SRPXP78539 464 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 ZNF92Q03936 586 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 SSX9Q7RTT3 188 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 C1orf87Q8N0U7 546 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 PIGCQ92535 297 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 RBMXL1Q96E39 390 aaKnown RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 SPIN2AQ99865 258 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 SPIN2BQ9BPZ2 258 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 SRXN1Q9BYN0 137 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 FRYLO94915 3013 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 PTBP3O95758 552 aaKnown RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 HLA-HP01893 362 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 PGA5P0DJD9 388 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 ZNF32P17041 273 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 TLE4Q04727 773 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 TMEM267Q0VDI3 215 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 HERPUD1Q15011 391 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 RABEPKQ7Z6M1 372 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 THNSL2Q86YJ6 484 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 ZNF611Q8N823 705 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 OR1F12Q8NHA8 337 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 GTF3AQ92664 365 aaKnown RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 PACRGQ96M98 296 aaPredicted RBP12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 ATP5SQ99766 215 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 CRLF2Q9HC73 371 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
THUMPD1-206ENST00000636554 A0A0G2JRQ6 117 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 DDTP30046 118 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 PAX9P55771 341 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 MRPS34P82930 218 aaKnown RBP12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 ID3Q02535 119 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 TMEM211Q6ICI0 200 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 ZNF880Q6PDB4 577 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 SLC25A26Q70HW3 274 aa12.88□□□□□ -0.35
THUMPD1-206ENST00000636554 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms