RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CADM4Q8NFZ8 388 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 GPR27Q9NS67 375 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 PMELP40967 661 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 ZFP36L2P47974 494 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 CDK5R1Q15078 307 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 OR6C3Q9NZP0 311 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 LAMB4A4D0S4 1761 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 LIMS3P0CW19 117 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 LIMS4P0CW20 117 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 FCARP24071 287 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 KIR3DL2P43630 455 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 KIR2DS2P43631 304 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 POLR2GP62487 172 aaKnown RBP eCLIP15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 C1orf185Q5T7R7 199 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 MDP1Q86V88 176 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 ITLN2Q8WWU7 325 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 SMPD2O60906 423 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 KCNK17Q96T54 332 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 TNFRSF12AQ9NP84 129 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 ZNF880Q6PDB4 577 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 FAM60AQ9NP50 221 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 ZNF638Q14966 1978 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 A0A1B0GU03 582 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 HRKO00198 91 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 HSF4Q9ULV5 492 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 SLC45A2Q9UMX9 530 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 JUNBP17275 347 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 CCKARP32238 428 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 KLRB1Q12918 225 aa15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 EIF3IQ13347 325 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 FAM53AQ6NSI3 398 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-227ENST00000636549 DHRS3O75911 302 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 ZNF485Q8NCK3 441 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 MARVELD3Q96A59 401 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 DIRC2Q96SL1 478 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 HEXA-AS1Q9H8Q6 139 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 GON7Q9BXV9 100 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 LYRM7Q5U5X0 104 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 Q8IYB0 196 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 FAM216AQ8WUB2 273 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 CISD1Q9NZ45 108 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 ZIC3O60481 467 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 S100A8P05109 93 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 CLDN18P56856 261 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 OR8B12Q8NGG6 310 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 OTOSQ8NHW6 89 aa15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 SNRNP40Q96DI7 357 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-227ENST00000636549 MAP1LC3B2A6NCE7 125 aa15.71■□□□□ 0.1
CACNA1A-227ENST00000636549 PELI3Q8N2H9 469 aa15.71■□□□□ 0.1
CACNA1A-227ENST00000636549 MAP1LC3BQ9GZQ8 125 aa15.71■□□□□ 0.1
CACNA1A-227ENST00000636549 ECM29Q5VYK3 1845 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 FTH1P19P0C7X4 201 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 WDR74Q6RFH5 385 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 NEIL1Q96FI4 390 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 METTL1Q9UBP6 276 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 GLULP15104 373 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 ACVR1Q04771 509 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 OR10D4PQ8NGN7 298 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 RGP1Q92546 391 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 C11orf68Q9H3H3 251 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 A0A1B0GV72 72 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 OR10J6PQ8NGY7 276 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 MVB12AQ96EY5 273 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 FAM157CP0CG43 387 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 EID2BQ96D98 161 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 ZNF658BQ4V348 819 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 LDLRAD3Q86YD5 345 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 NT5CQ8TCD5 201 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 OOEPA6NGQ2 149 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 HPXP02790 462 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 ARF6P62330 175 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 NKG7Q16617 165 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 MUC20Q8N307 709 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 OR51B2Q9Y5P1 312 aa15.7■□□□□ 0.1
CACNA1A-227ENST00000636549 EIF3GO75821 320 aaKnown RBP eCLIP15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 MOGAT2Q3SYC2 334 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 CBLN3Q6UW01 205 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 LCN2P80188 198 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 OR10C1Q96KK4 312 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 TMEM30AQ9NV96 361 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 SYNGR2O43760 224 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 IZUMO4Q1ZYL8 232 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 B3GNT9Q6UX72 402 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 OR4S2Q8NH73 311 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 KIF13AQ9H1H9 1805 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 SPAG17Q6Q759 2223 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 HSPB2A8KAH6 182 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 CLDN14O95500 239 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 CD96P40200 585 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 HSPB2Q16082 182 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 UNQ5815/PRO19632Q6UWF5 114 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 MAP1LC3CQ9BXW4 147 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 SRSF10O75494 262 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 NXPH1P58417 271 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 MEIG1Q5JSS6 88 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 LHX8Q68G74 356 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 SPRED2Q7Z698 418 aa15.69■□□□□ 0.1
CACNA1A-227ENST00000636549 PGPEP1Q9NXJ5 209 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms