RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TMEM210A6NLX4 147 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 H7C2G1 150 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 BCL2L11O43521 198 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 EPPINO95925 133 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IGHV3-13P01766 116 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IGHV3-7P01780 117 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GP1BAP07359 652 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SLC6A12P48065 614 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 UQCC3Q6UW78 93 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GLCCI1Q86VQ1 547 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SSC4DQ8WTU2 575 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TOLLIPQ9H0E2 274 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MMP26Q9NRE1 261 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM38BQ9NVV0 291 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZFP30Q9Y2G7 519 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 DUXBA0A1W2PPF3 345 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 LINC01565O15544 149 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 CDK2AP2O75956 126 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ERASQ7Z444 233 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZIC5Q96T25 663 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 C20orf27Q9GZN8 174 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 LHX9Q9NQ69 397 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM56-RWDD3S4R434 201 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 AESQ08117 197 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CDK5R1Q15078 307 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PSG5Q15238 335 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 OR2T10Q8NGZ9 312 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 SPNS1Q9H2V7 528 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 GPR35Q9HC97 309 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 SLC17A5Q9NRA2 495 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 NAT8Q9UHE5 227 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 LOC389332A0A1B0GUA5 103 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 MAP1LC3B2A6NCE7 125 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 C1QBP02746 253 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 LBHQ53QV2 105 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 C1orf185Q5T7R7 199 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 LINC00596Q86U02 117 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 BPIFA4PQ86YQ2 179 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 OTOSQ8NHW6 89 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 FGF11Q92914 225 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 VN1R1Q9GZP7 353 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 MAP1LC3BQ9GZQ8 125 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 KLKB1P03952 638 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CST2P09228 141 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 DAOP14920 347 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 TIAL1Q01085 375 aaKnown RBP eCLIP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 KLRB1Q12918 225 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 IL13RA2Q14627 380 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 HIST3H3Q16695 136 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 LINC00615Q96LM1 132 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 TMPRSS13Q9BYE2 586 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 OR5AC1P0C628 307 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 APELAP0DMC3 54 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 GABRG2P18507 467 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 DGCR2P98153 550 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 EID2BQ96D98 161 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 TBX15Q96SF7 602 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 FANCMQ8IYD8 2048 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PDE6DO43924 150 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CST4P01036 141 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PGA4P0DJD7 388 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PGA5P0DJD9 388 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PDLIM4P50479 330 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 GFRA1P56159 465 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 WNT3P56703 355 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CLPPQ16740 277 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 FGF14Q92915 247 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 GALNT14Q96FL9 552 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 VGLL1Q99990 258 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 SLC25A19Q9HC21 320 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 EMCNQ9ULC0 261 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 DOCK1Q14185 1865 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 LRP6O75581 1613 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 ARRDC5A6NEK1 342 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 MBPP02686 304 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 INHBBP09529 407 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 SFTA3P0C7M3 94 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 RPS19P39019 145 aaKnown RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 ATP5J2P56134 94 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 OR2D3Q8NGH3 330 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 OR13C6PQ8NH95 151 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 C2orf88Q9BSF0 95 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 IGKV3OR2-268A0A0C4DH90 116 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 UPK1AO00322 258 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PDCD6O75340 191 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CXorf1O96002 111 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CCL2P13500 99 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 SUCLG1P53597 346 aaKnown RBP4.92□□□□□ -1.62
SCN1A-209ENST00000635750 C11orf87Q6NUJ2 197 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 OLIG3Q7RTU3 272 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM179BQ7Z7N9 219 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM183AQ8IXX5 376 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 CELF2-AS1Q8N7Q2 184 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 MAP6Q96JE9 813 aa4.92□□□□□ -1.62
SCN1A-209ENST00000635750 PRELID3AQ96N28 172 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms