RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 HSPA12AO43301 675 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 NXPH3O95157 252 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 CER1O95813 267 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 FAM90A15PP0C7V4 464 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 FAM90A13PP0C7W8 464 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 FAM90A14PP0C7W9 464 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 FAM90A24PP0C7X0 464 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 CBR1P16152 277 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 EIF2S3LQ2VIR3 472 aaKnown RBP9.2□□□□□ -0.94
PSPC1-207ENST00000635251 DCAF12Q5T6F0 453 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 ZDHHC23Q8IYP9 409 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 GAPTQ8N292 157 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 SUMF2Q8NBJ7 301 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
PSPC1-207ENST00000635251 PI4KAP42356 2102 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 ZNF724A8MTY0 619 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TRAPPC2LH3BP13 241 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 K7N7A8 449 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 WRBO00258 174 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 SLC33A1O00400 549 aaPredicted RBP9.2□□□□□ -0.94
PSPC1-207ENST00000635251 PITX3O75364 302 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 HLA-HP01893 362 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 ARG1P05089 322 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 ATP6V0CP27449 155 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 SULT1A1P50225 295 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 FGF12P61328 243 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TRIM61Q5EBN2 209 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 SPINK14Q6IE38 97 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TMEM252Q8N6L7 170 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 OR1J1Q8NGS3 322 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TMEM45BQ96B21 275 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TMEM56Q96MV1 263 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 IFT22Q9H7X7 185 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TUBA4BQ9H853 241 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 CALHM2Q9HA72 323 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 BOKQ9UMX3 212 aaPredicted RBP9.2□□□□□ -0.94
PSPC1-207ENST00000635251 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
PSPC1-207ENST00000635251 RFNGQ9Y644 331 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 TMEM56-RWDD3S4R434 201 aa9.2□□□□□ -0.94
PSPC1-207ENST00000635251 KIR2DS1A0A191URI9 304 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 SLC22A20A6NK97 555 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 ZNF732B4DXR9 585 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 TNFSF12O43508 249 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 KIR2DS4P43632 304 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CEBPGP53567 150 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 GFRA1P56159 465 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 RND3P61587 244 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 KIR2DS1Q14954 304 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 DAZAP2Q15038 168 aaPredicted RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 RHEBQ15382 184 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 TSC22D1Q15714 1073 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CEACAM21Q3KPI0 293 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CXorf66Q5JRM2 361 aaPredicted RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 SOHLH1Q5JUK2 328 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 C6orf15Q6UXA7 325 aaPredicted RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 MKXQ8IYA7 352 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 FAM24BQ8N5W8 94 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 ARL6IP6Q8N6S5 226 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 TMEM217Q8N7C4 229 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 OR5C1Q8NGR4 320 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CT55Q8WUE5 264 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 RARRES2Q99969 163 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CCL28Q9NRJ3 127 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 LYRM2Q9NU23 88 aaPredicted RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 LRFN1Q9P244 771 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 IL36RNQ9UBH0 155 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 ARID1AO14497 2285 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 IGKV1D-13A0A0B4J2D9 117 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 hCG_1809904A0A1W2PP81 198 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 A0A1W2PPE2 198 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 A0A1W2PR64 198 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 A0A1W2PRV1 198 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CDRT15L2A8MXV6 281 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CST7O76096 145 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 S100A9P06702 114 aaKnown RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 IGKV1-13P0DP09 117 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 RAB5AP20339 215 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 FOXO1Q12778 655 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 SSPNQ14714 243 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 NRN1LQ496H8 165 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 Q6ZS49 121 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 COLCA1Q6ZS62 124 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 TUSC5Q8IXB3 177 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CMTM1Q8IZ96 169 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 THOC3Q96J01 351 aaKnown RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 REPIN1Q9BWE0 567 aaKnown RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 PRRG4Q9BZD6 226 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 C11orf1Q9H5F2 150 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 ATPIF1Q9UII2 106 aa9.19□□□□□ -0.94
PSPC1-207ENST00000635251 MRPS18CQ9Y3D5 142 aaKnown RBP9.19□□□□□ -0.94
PSPC1-207ENST00000635251 NCKAP5O14513 1909 aa9.18□□□□□ -0.94
PSPC1-207ENST00000635251 RBFOX3A6NFN3 312 aa9.18□□□□□ -0.94
PSPC1-207ENST00000635251 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
PSPC1-207ENST00000635251 PRSS44E7EML9 344 aa9.18□□□□□ -0.94
PSPC1-207ENST00000635251 SYNGR4O95473 234 aa9.18□□□□□ -0.94
PSPC1-207ENST00000635251 NAPSAO96009 420 aa9.18□□□□□ -0.94
PSPC1-207ENST00000635251 SERPINA7P05543 415 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms