RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	SSX3	Q99909	188 aa		5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DCTN5	Q9BTE1	182 aa		5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	FAM118A	Q9NWS6	357 aa		5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ACTR3B	Q9P1U1	418 aa		5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	EXTL2	Q9UBQ6	330 aa		5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	PRPF19	Q9UMS4	504 aa	Known RBP	5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SIGLEC7	Q9Y286	467 aa		5.18	□□□□□ -1.58
SMARCA2-223	ENST00000634435	RYR3	Q15413	4870 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	IGLV1-36	A0A0B4J1U3	117 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	PRAC2	D3DTV9	90 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435		M0R1W7	72 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	CCL24	O00175	119 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	MRAS	O14807	208 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	FFAR1	O14842	300 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	CHST1	O43916	411 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	TXNDC12	O95881	172 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	REN	P00797	406 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	LHB	P01229	141 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SLC2A1	P11166	492 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	IGLL1	P15814	213 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	PAICS	P22234	425 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DUT	P33316	252 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	KDELR2	P33947	212 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	GSK3B	P49841	420 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SELENOW	P63302	87 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	RFX4	Q33E94	735 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SLC36A3	Q495N2	470 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DEFB121	Q5J5C9	76 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	FGD3	Q5JSP0	725 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	GLYATL3	Q5SZD4	288 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	CD164L2	Q6UWJ8	174 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DPY19L2P2	Q6ZN68	376 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DPY19L4	Q7Z388	723 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	TSEN54	Q7Z6J9	526 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	NFE4	Q86UQ8	179 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	CYP4Z1	Q86W10	505 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR6V1	Q8N148	313 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR4C15	Q8NGM1	316 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR9Q1	Q8NGQ5	310 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR13C3	Q8NGS6	347 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	C8orf46	Q8TAG6	207 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	FAM46B	Q96A09	425 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	C12orf43	Q96C57	262 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SEH1L	Q96EE3	360 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	NMNAT3	Q96T66	252 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	COPS4	Q9BT78	406 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	PAPOLG	Q9BWT3	736 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	NSRP1	Q9H0G5	558 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	RPRD1B	Q9NQG5	326 aa	Known RBP	5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ADA2	Q9NZK5	511 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	CYB5R1	Q9UHQ9	305 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	B9D1	Q9UPM9	204 aa		5.17	□□□□□ -1.58
SMARCA2-223	ENST00000634435	IGLV9-49	A0A0B4J1Y8	123 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435		A0A0G2JND7	137 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	TRBV5-5	A0A0J9YX44	114 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	LOC100653049	A0A140TA62	436 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	KRT34	O76011	436 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	IGKV2-30	P06310	120 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	AREG	P15514	252 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ANOS1	P23352	680 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	PAX6	P26367	422 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	NAA10	P41227	235 aa	Predicted RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	RPS27	P42677	84 aa	Known RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SLC7A2	P52569	658 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	FXYD6P3	P58550	94 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SLC35A2	P78381	396 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	HTD2	P86397	168 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	AANAT	Q16613	207 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	STUM	Q69YW2	141 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SMARCD3	Q6STE5	483 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DRAM2	Q6UX65	266 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	WDR82	Q6UXN9	313 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	WDR86	Q86TI4	376 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	SDR9C7	Q8NEX9	313 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR1M1	Q8NGA1	313 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR5T2	Q8NGG2	359 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR5D13	Q8NGL4	314 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR4K13	Q8NH42	304 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	RFT1	Q96AA3	541 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	DUS3L	Q96G46	650 aa	Known RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	RBM14	Q96PK6	669 aa	Known RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ERMAP	Q96PL5	475 aa	Predicted RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	OR5M11	Q96RB7	305 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	C1QTNF4	Q9BXJ3	329 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ANKRD19P	Q9H560	264 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ZNF702P	Q9H963	129 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ELL3	Q9HB65	397 aa	Predicted RBP	5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	TMBIM4	Q9HC24	238 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	TAS2R3	Q9NYW6	316 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	KCNG2	Q9UJ96	466 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	ZNF391	Q9UJN7	358 aa		5.16	□□□□□ -1.58
SMARCA2-223	ENST00000634435	BBIP1	A8MTZ0	92 aa		5.15	□□□□□ -1.59
SMARCA2-223	ENST00000634435		E5RGE8	158 aa		5.15	□□□□□ -1.59
SMARCA2-223	ENST00000634435		E9PQ18	207 aa		5.15	□□□□□ -1.59
SMARCA2-223	ENST00000634435	CDIPT	O14735	213 aa		5.15	□□□□□ -1.59
SMARCA2-223	ENST00000634435	SIGLEC5	O15389	551 aa		5.15	□□□□□ -1.59
SMARCA2-223	ENST00000634435	XRCC2	O43543	280 aa		5.15	□□□□□ -1.59
SMARCA2-223	ENST00000634435	DFFB	O76075	338 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms