RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZNF729A6NN14 1252 aaPredicted RBP18.11■□□□□ 0.49
SF1-220ENST00000626028 PTGES3LE9PB15 166 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 H0YHG0 523 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 SLC35A2P78381 396 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 MPV17LQ2QL34 196 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 PAN3Q58A45 887 aaKnown RBP18.11■□□□□ 0.49
SF1-220ENST00000626028 PRR31Q5SQ13 230 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 OSR2Q8N2R0 312 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 NKAIN3Q8N8D7 197 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 CREB3L1Q96BA8 519 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 RANBP3Q9H6Z4 567 aaPredicted RBP18.11■□□□□ 0.49
SF1-220ENST00000626028 ST3GAL6Q9Y274 331 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 RNF114Q9Y508 228 aa18.11■□□□□ 0.49
SF1-220ENST00000626028 TRAV8-7A0A075B6U6 113 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 TRAV24A0A0B4J272 114 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 MEGF11A6BM72 1044 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 CDRT1O95170 752 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 HTR3BO95264 441 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 GTF2F2P13984 249 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 CD34P28906 385 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 RBM11P57052 281 aaKnown RBP18.1■□□□□ 0.49
SF1-220ENST00000626028 DYNC1I2Q13409 638 aaKnown RBP18.1■□□□□ 0.49
SF1-220ENST00000626028 SPHARQ15513 63 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 C11orf88Q6PI97 169 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 Q6ZSV7 163 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 OR4D6Q8NGJ1 314 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 ZNF596Q8TC21 504 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 TAF15Q92804 592 aaKnown RBP eCLIP18.1■□□□□ 0.491e-8■■□□□ 12.7
SF1-220ENST00000626028 NR1H4Q96RI1 486 aaPredicted RBP18.1■□□□□ 0.49
SF1-220ENST00000626028 LINC00574Q9H8X3 128 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 PITPNC1Q9UKF7 332 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 ING4Q9UNL4 249 aa18.1■□□□□ 0.49
SF1-220ENST00000626028 A0A087X0M5 115 aa18.09■□□□□ 0.49
SF1-220ENST00000626028 A0A1B0GX30 115 aa18.09■□□□□ 0.49
SF1-220ENST00000626028 ERICH4A6NGS2 130 aa18.09■□□□□ 0.49
SF1-220ENST00000626028 ATXN7L3Q14CW9 347 aaPredicted RBP18.09■□□□□ 0.49
SF1-220ENST00000626028 LHFPL4Q7Z7J7 247 aa18.09■□□□□ 0.49
SF1-220ENST00000626028 UQCC2Q9BRT2 126 aa18.09■□□□□ 0.49
SF1-220ENST00000626028 DUSP21Q9H596 190 aa18.09■□□□□ 0.49
SF1-220ENST00000626028 PNMA8CA0A1B0GUJ8 204 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 MEX3AA1L020 520 aaKnown RBP18.08■□□□□ 0.48
SF1-220ENST00000626028 CDK2P24941 298 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 HTR1DP28221 377 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 PROK1P58294 105 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 IRF3Q14653 427 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 PIGYQ3MUY2 71 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 ABHD12Q8N2K0 398 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 OR10K1Q8NGX5 313 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 PIFOQ8TCI5 191 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 CITED1Q99966 193 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 SPACA1Q9HBV2 294 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 ABCB10Q9NRK6 738 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 FBLN5Q9UBX5 448 aa18.08■□□□□ 0.48
SF1-220ENST00000626028 LSM2Q9Y333 95 aaKnown RBP18.08■□□□□ 0.48
SF1-220ENST00000626028 MGAM2Q2M2H8 2515 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 KBTBD11-OT1A0A1B0GTJ5 212 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 H3BUI4 141 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 CGB3P0DN86 165 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 CGB7P0DN87 165 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 SSX2Q16385 188 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 UNQ9370/PRO34162Q6UXP9 181 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 JAGN1Q8N5M9 183 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 OR10A7Q8NGE5 316 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 ORAI1Q96D31 301 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 DPCDQ9BVM2 203 aaPredicted RBP18.07■□□□□ 0.48
SF1-220ENST00000626028 GHRLQ9UBU3 117 aa18.07■□□□□ 0.48
SF1-220ENST00000626028 MEIKINA0A087WXM9 373 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 MMP23AO75900 390 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 OR7C1O76099 320 aaPredicted RBP18.06■□□□□ 0.48
SF1-220ENST00000626028 IGLV1-47P01700 117 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 SERPINA2P20848 420 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 CEACAM3P40198 252 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 KIR2DS4P43632 304 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 ARHGDIBP52566 201 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 SLC22A6Q4U2R8 563 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 RSBN1Q5VWQ0 802 aaPredicted RBP18.06■□□□□ 0.48
SF1-220ENST00000626028 SLC35E4Q6ICL7 350 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 SLC16A12Q6ZSM3 486 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 LYPD6Q86Y78 171 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 OR4P4Q8NGL7 312 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 PHYHIPQ92561 330 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 NPFFR1Q9GZQ6 430 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 PPIL3Q9H2H8 161 aaKnown RBP18.06■□□□□ 0.48
SF1-220ENST00000626028 ISYNA1Q9NPH2 558 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 KIF25Q9UIL4 384 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 TCF19Q9Y242 345 aa18.06■□□□□ 0.48
SF1-220ENST00000626028 MRPS28Q9Y2Q9 187 aaKnown RBP18.06■□□□□ 0.48
SF1-220ENST00000626028 MAGEA13PA6NCF6 341 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A10PA6NDY2 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A18PA6NE21 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A16PA6NEW6 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A20PA6NIJ5 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A7PA6NKC0 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A22PA8MWA6 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A12PA8MX19 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A5PA8MXJ8 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A23PA8MXZ1 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 PIN1P1O15428 100 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A15PP0C7V4 464 aa18.05■□□□□ 0.48
SF1-220ENST00000626028 FAM90A13PP0C7W8 464 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms