RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 EGLN1Q9GZT9 426 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 TAAR3PQ9P1P4 343 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 ZDHHC8Q9ULC8 765 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 YBX2Q9Y2T7 364 aaKnown RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 CD74P04233 296 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 RNF224P0DH78 156 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 MYOGP15173 224 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 GNG3P63215 75 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR5AS1Q8N127 324 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 ZADH2Q8N4Q0 377 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 TUBD1Q9UJT1 453 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 WIPI2Q9Y4P8 454 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR51B4Q9Y5P0 310 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 NEURL1O76050 574 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 VSIG8P0DPA2 414 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR8G5Q8NG78 346 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR5R1Q8NH85 324 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 SLC25A38Q96DW6 304 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 NKX2-6A6NCS4 301 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 HINT1P49773 126 aaPredicted RBP7.87□□□□□ -1.15
VCL-206ENST00000623461 EFNB1P98172 346 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 ASB10Q8WXI3 467 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 WNT2BQ93097 391 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 SRD5A3Q9H8P0 318 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 LANCL2Q9NS86 450 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 SLC2A8Q9NY64 477 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 LOC102724200A0A096LPH7 203 aaPredicted RBP7.87□□□□□ -1.15
VCL-206ENST00000623461 A0A1B0GV72 72 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 HAND1O96004 215 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 CTLA4P16410 223 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR2M7Q8NG81 312 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR4A4PQ8NGN8 299 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 PMCHL2Q9BQD1 86 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 A0A087WWC5 75 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 PPYP01298 95 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 SGMS2Q8NHU3 365 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 FLRT3Q9NZU0 649 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 MOSPD3O75425 235 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 SRSF10O75494 262 aaKnown RBP7.87□□□□□ -1.15
VCL-206ENST00000623461 CEACAM5P06731 702 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 TMEM50BP56557 158 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 SLC36A1Q7Z2H8 476 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 D2HGDHQ8N465 521 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 OR8B12Q8NGG6 310 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 LPAR5Q9H1C0 372 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 DECR2Q9NUI1 292 aa7.87□□□□□ -1.15
VCL-206ENST00000623461 TRPM7Q96QT4 1865 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 A0A1W2PPC1 479 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 SMPD2O60906 423 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 ERVFRD-1P60508 538 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 RTN4RL1Q86UN2 441 aaPredicted RBP7.86□□□□□ -1.15
VCL-206ENST00000623461 EID2BQ96D98 161 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 NUDT16L1Q9BRJ7 211 aaKnown RBP7.86□□□□□ -1.15
VCL-206ENST00000623461 ZFP30Q9Y2G7 519 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 FOLR2P14207 255 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 CAMPP49913 170 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 LBX1P52954 281 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 FMODQ06828 376 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 CD226Q15762 336 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 OR13H1Q8NG92 308 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 OR4C3Q8NH37 302 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 LRFN3Q9BTN0 628 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 TRBV9A0A0B4J1U6 114 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 HELTA6NFD8 242 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 FABP2P12104 132 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 RIGQ13278 110 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 Q56UQ5 140 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 SPNS3Q6ZMD2 512 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 ATG4DQ86TL0 474 aaPredicted RBP7.86□□□□□ -1.15
VCL-206ENST00000623461 TMEM56Q96MV1 263 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 PCGF1Q9BSM1 259 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 BARX1Q9HBU1 254 aaPredicted RBP7.86□□□□□ -1.15
VCL-206ENST00000623461 MTCL1Q9Y4B5 1905 aaKnown RBP7.86□□□□□ -1.15
VCL-206ENST00000623461 ALG1L2C9J202 215 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 SP1P08047 785 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 SMIM21Q3B7S5 101 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 ZNF260Q3ZCT1 412 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 HIKESHIQ53FT3 197 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 DOCK5Q9H7D0 1870 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 DEFB103AP81534 67 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 AGBL5Q8NDL9 886 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 ADAT3Q96EY9 351 aaPredicted RBP7.86□□□□□ -1.15
VCL-206ENST00000623461 MOGAT1Q96PD6 335 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 OR2V2Q96R30 315 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 CORTO00230 105 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 CNIH1O95406 144 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 OR1N1Q8NGS0 311 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 OR1L3Q8NH93 324 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 ANK1P16157 1881 aa7.86□□□□□ -1.15
VCL-206ENST00000623461 NDUFB7P17568 137 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 NKAIN1Q4KMZ8 207 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 DMRTA1Q5VZB9 504 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 FAM219AQ8IW50 185 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 OR2V1Q8NHB1 315 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 NDUFAF3Q9BU61 184 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 HES4Q9HCC6 221 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 FOXJ2Q9P0K8 574 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 ASCC3Q8N3C0 2202 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 LRRC3CA6NJW4 275 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 TCTAP57738 103 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms