RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MRPL37Q9BZE1 423 aaKnown RBP12.2□□□□□ -0.46
LDB3-209ENST00000623056 TRIOBPQ9H2D6 2365 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 ZFP92A6NM28 416 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 M0R135 149 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 NXPH3O95157 252 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 GUCA1AP43080 201 aaPredicted RBP12.19□□□□□ -0.46
LDB3-209ENST00000623056 CLDN17P56750 224 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 NUTF2P61970 127 aaKnown RBP12.19□□□□□ -0.46
LDB3-209ENST00000623056 MPV17LQ2QL34 196 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 OR10A7Q8NGE5 316 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 LMX1AQ8TE12 382 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 ZNF799Q96GE5 643 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 ABHD14BQ96IU4 210 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 SIGLEC12Q96PQ1 595 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 SDF2L1Q9HCN8 221 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
LDB3-209ENST00000623056 PIAS3Q9Y6X2 628 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 SPAG17Q6Q759 2223 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 OR2J2O76002 312 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 IL18BPO95998 194 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 BCL2P10415 239 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 GNRHRP30968 328 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 OTX1P32242 354 aaPredicted RBP12.19□□□□□ -0.46
LDB3-209ENST00000623056 APLNRP35414 380 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 MRPS21P82921 87 aaKnown RBP12.19□□□□□ -0.46
LDB3-209ENST00000623056 COL10A1Q03692 680 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 TCEAL6Q6IPX3 200 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 FAM185AQ8N0U4 392 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 OR1P1Q8NH06 330 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 DDA1Q9BW61 102 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 PRO3102Q9H379 93 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 ZNF665Q9H7R5 613 aa12.19□□□□□ -0.46
LDB3-209ENST00000623056 PTRH2Q9Y3E5 179 aaKnown RBP12.19□□□□□ -0.46
LDB3-209ENST00000623056 IGKV1-12A0A0C4DH73 117 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 EREGO14944 169 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 TLX3O43711 291 aaPredicted RBP12.18□□□□□ -0.46
LDB3-209ENST00000623056 CYTIPO60759 359 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 IGKV1D-12P01611 117 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 ARL4DP49703 201 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 CCR5P51681 352 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 PRSS12P56730 875 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 ID3Q02535 119 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 EXT1Q16394 746 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 PHYHD1Q5SRE7 291 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 THNSL2Q86YJ6 484 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
LDB3-209ENST00000623056 PLPPR1Q8TBJ4 325 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 LRFN1Q9P244 771 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 OR14J1Q9UGF5 321 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 SPEGQ15772 3267 aa12.18□□□□□ -0.46
LDB3-209ENST00000623056 MYO15AQ9UKN7 3530 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 AQP7P3A6NL99 342 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 ZNF705GA8MUZ8 300 aaPredicted RBP12.17□□□□□ -0.46
LDB3-209ENST00000623056 CHST1O43916 411 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 IGFBP4P22692 258 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 CASP6P55212 293 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 PDCD1Q15116 288 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 CA5BP1Q8WTZ4 195 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 SRD5A3Q9H8P0 318 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 MTCH2Q9Y6C9 303 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 C2CD4DB7Z1M9 353 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 CD55P08174 381 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 MMP9P14780 707 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 MSX1P28360 303 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 IL24Q13007 206 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 NKAIN1Q4KMZ8 207 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 ASCL4Q6XD76 172 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 OSR2Q8N2R0 312 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 RNF138Q8WVD3 245 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 NABP1Q96AH0 204 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 GPHA2Q96T91 129 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 CTDSP1Q9GZU7 261 aa12.17□□□□□ -0.46
LDB3-209ENST00000623056 A0A1B0GX78 115 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 CLEC18AA5D8T8 446 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 PTGDSP41222 190 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 PAX9P55771 341 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 CLN3Q13286 438 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 OR8B8Q15620 311 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 SPIN3Q5JUX0 258 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 LCN15Q6UWW0 184 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 NAT6Q93015 286 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 RPRMQ9NS64 109 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 SLC7A10Q9NS82 523 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 PLEK2Q9NYT0 353 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 GAB2Q9UQC2 676 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 ST3GAL6Q9Y274 331 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 PDCD6O75340 191 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 DFFBO76075 338 aa12.16□□□□□ -0.46
LDB3-209ENST00000623056 HLA-HP01893 362 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms