RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SDK2Q58EX2 2172 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 PIGBOS1A0A0B4J2F0 54 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 BTBD17A6NE02 478 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR5B21A6NL26 309 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 H0Y980 276 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SCTP09683 121 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC25A6P12236 298 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 CEACAM1P13688 526 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 PRKACAP17612 351 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 MAS1LP35410 378 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 HAAOP46952 286 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 FOXG1P55316 489 aaPredicted RBP8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZXDAP98168 799 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF266Q14584 549 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 HERPUD1Q15011 391 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 ABHD17BQ5VST6 288 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SHEQ5VZ18 495 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SPINK14Q6IE38 97 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 MEX3BQ6ZN04 569 aaKnown RBP8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF818PQ6ZRF7 136 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 C1orf210Q8IVY1 113 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 TUSC5Q8IXB3 177 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 TMEM252Q8N6L7 170 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 NAXEQ8NCW5 288 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 MRPL30Q8TCC3 161 aaKnown RBP8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR5P3Q8WZ94 311 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SIGLEC12Q96PQ1 595 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 HIST1H2AAQ96QV6 131 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 CABLES2Q9BTV7 478 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 GPR87Q9BY21 358 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 PKIBQ9C010 78 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC35B3Q9H1N7 401 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 HIPK2Q9H2X6 1198 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 ESRP2Q9H6T0 727 aaKnown RBP8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 LYRM2Q9NU23 88 aaPredicted RBP8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 ABI3Q9P2A4 366 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 LHX6Q9UPM6 363 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 MPC1Q9Y5U8 109 aa8.23□□□□□ -1.09
IGHV3-54-201ENST00000622166 A0A096LPE4 126 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 IGKV1D-13A0A0B4J2D9 117 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 IGKV1-6A0A0C4DH72 117 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 A0A1W2PPZ6 126 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 C7orf77A4D0Y5 90 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 C5orf49A4QMS7 147 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF503-AS2A6NEH8 195 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF98A6NK75 572 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 C21orf140B9A014 251 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 C9orf172C9J069 976 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 NPIPB11E5RHQ5 1161 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 HSPA12AO43301 675 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 ADAM20O43506 726 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC34A2O95436 690 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 IGHV3-9P01782 118 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 HLA-HP01893 362 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 PRH1P02810 166 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 MT-ND4LP03901 98 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 CELA3AP09093 270 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 IGKV1-13P0DP09 117 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 GLI4P10075 376 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 VDAC1P21796 283 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 PTAFRP25105 342 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 PPT1P50897 306 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 NOVA1P51513 510 aaKnown RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 GPM6AP51674 278 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 RAB5BP61020 215 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 RAB1AP62820 205 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 VAMP2P63027 116 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 PLP2Q04941 152 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 BAXQ07812 192 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF616Q08AN1 781 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 IL24Q13007 206 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 HABP2Q14520 560 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 AWAT1Q58HT5 328 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF324BQ6AW86 544 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 SPSB3Q6PJ21 355 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 PCSK4Q6UW60 755 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 TMEM182Q6ZP80 229 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 H1FOOQ8IZA3 346 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 GAPTQ8N292 157 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 HSD17B11Q8NBQ5 300 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 APH1AQ96BI3 265 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 GNPNAT1Q96EK6 184 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 CLCC1Q96S66 551 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 TTTY12Q9BZ98 90 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 PARP12Q9H0J9 701 aaKnown RBP8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 CALHM2Q9HA72 323 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 RPS10P5Q9NQ39 176 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 CCL28Q9NRJ3 127 aa8.22□□□□□ -1.09
IGHV3-54-201ENST00000622166 LRP5LA4QPB2 252 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 PROB1E7EW31 1015 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 SYNGR1O43759 233 aa8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 PGLYRP1O75594 196 aaPredicted RBP8.21□□□□□ -1.1
IGHV3-54-201ENST00000622166 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms