RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ABHD14BQ96IU4 210 aa8.07□□□□□ -1.12
PDPN-212ENST00000621990 IL36RNQ9UBH0 155 aa8.07□□□□□ -1.12
PDPN-212ENST00000621990 RCL1Q9Y2P8 373 aaKnown RBP8.07□□□□□ -1.12
PDPN-212ENST00000621990 LIPGQ9Y5X9 500 aa8.07□□□□□ -1.12
PDPN-212ENST00000621990 DUXBA0A1W2PPF3 345 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 J3QW42 95 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 SCTP09683 121 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 SPP1P10451 314 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 LMO1P25800 156 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 SLC10A1Q14973 349 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 ZNF880Q6PDB4 577 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 ZNF573Q86YE8 665 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 BATF2Q8N1L9 274 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 BSCL2Q96G97 398 aaPredicted RBP8.06□□□□□ -1.12
PDPN-212ENST00000621990 WDYHV1Q96HA8 205 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 PKIBQ9C010 78 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 WFDC1Q9HC57 220 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 PRSS50Q9UI38 385 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 IGKV1-6A0A0C4DH72 117 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 SLC22A20A6NK97 555 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 SYNGR1O43759 233 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 FBXO24O75426 580 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 TNFSF15O95150 251 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 DANCRP0C864 163 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 IL32P24001 234 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 SOX8P57073 446 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 C3AR1Q16581 482 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 FBXW9Q5XUX1 488 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 FBXW12Q6X9E4 464 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 ZNF818PQ6ZRF7 136 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 TBC1D26Q86UD7 250 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 MRPL30Q8TCC3 161 aaKnown RBP8.06□□□□□ -1.12
PDPN-212ENST00000621990 BOD1Q96IK1 185 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 ZDHHC11Q9H8X9 412 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 TREM1Q9NP99 234 aa8.06□□□□□ -1.12
PDPN-212ENST00000621990 FAM212BQ9NTI7 297 aaPredicted RBP8.06□□□□□ -1.12
PDPN-212ENST00000621990 DNAJC13O75165 2243 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 BORCS7-ASMTA0A0B4J1R7 106 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 ANKRD30BLA7E2S9 258 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 RNASEK-C17orf49H0YIS7 233 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 ZNHIT1O43257 154 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 LILRA1O75019 489 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 SNAPINO95295 136 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 WNT2P09544 360 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 CD46P15529 392 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 UCP1P25874 307 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 APLNRP35414 380 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 GNG3P63215 75 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 CLN3Q13286 438 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 NMSQ5H8A3 153 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 HES3Q5TGS1 186 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 PCSK4Q6UW60 755 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 DHRS13Q6UX07 377 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 MCEMP1Q8IX19 187 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 SUMF2Q8NBJ7 301 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 HIST1H2AAQ96QV6 131 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 SMIM3Q9BZL3 60 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 OR51I2Q9H344 312 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 FAM96BQ9Y3D0 163 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 ZNF175Q9Y473 711 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 HEXAP06865 529 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 GLI4P10075 376 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 DVL1P1P54792 670 aaPredicted RBP8.05□□□□□ -1.12
PDPN-212ENST00000621990 TSC22D1Q15714 1073 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 HIKESHIQ53FT3 197 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 Q6ZRG5 221 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.05□□□□□ -1.12
PDPN-212ENST00000621990 SELENOHQ8IZQ5 122 aaKnown RBP8.05□□□□□ -1.12
PDPN-212ENST00000621990 GAPTQ8N292 157 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 COMMD1Q8N668 190 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 LILRB1Q8NHL6 650 aaPredicted RBP8.05□□□□□ -1.12
PDPN-212ENST00000621990 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
PDPN-212ENST00000621990 IL22RA2Q969J5 263 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 AIFM2Q9BRQ8 373 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 TMEM231Q9H6L2 316 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 SPRR3Q9UBC9 169 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 NDRG3Q9UGV2 375 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 ARID1AO14497 2285 aa8.05□□□□□ -1.12
PDPN-212ENST00000621990 TRAV24A0A0B4J272 114 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 NKX2-6A6NCS4 301 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 NPIPB11E5RHQ5 1161 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 ATP6V1G2-DDX39BF2Z307 99 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 PRKACAP17612 351 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 RAB5CP51148 216 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 NOVA1P51513 510 aaKnown RBP8.04□□□□□ -1.12
PDPN-212ENST00000621990 HFEQ30201 348 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 FAM76BQ5HYJ3 339 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 RNFT1Q5M7Z0 435 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 HAGHLQ6PII5 290 aaPredicted RBP8.04□□□□□ -1.12
PDPN-212ENST00000621990 SPIN2AQ99865 258 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 SPIN2BQ9BPZ2 258 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 CABLES2Q9BTV7 478 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 SCRT1Q9BWW7 348 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 FRYQ5TBA9 3013 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 H0Y980 276 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 SFTA3P0C7M3 94 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 OR8U9P0C7N5 309 aa8.04□□□□□ -1.12
PDPN-212ENST00000621990 ZNF14P17017 642 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms