RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ALKAL2Q6UX46 152 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 OR8H3Q8N146 312 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 C12orf45Q8N5I9 185 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 TERB2Q8NHR7 220 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 PLPPR1Q8TBJ4 325 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 H1FXQ92522 213 aaKnown RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 ZNF75AQ96N20 296 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 RTL8AQ9BWD3 113 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 COQ3Q9NZJ6 369 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 COPZ2Q9P299 210 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 PHF1O43189 567 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 PDCD6O75340 191 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 AADACP22760 399 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 DYRK1AQ13627 763 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 FAM74A1Q5RGS3 127 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 C11orf87Q6NUJ2 197 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 ARL6Q9H0F7 186 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 C5orf66Q9H5L9 145 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 LPAR2Q9HBW0 351 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 CCL28Q9NRJ3 127 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 MBD3L4A6NDZ8 208 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 MBD3L3A6NE82 208 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 MBD3L5A6NJ08 208 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 CHATP28329 748 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 SERPINF1P36955 418 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 KLF3P57682 345 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 HERV-K104P61576 105 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 MEF2DQ14814 521 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 KRTCAP3Q53RY4 240 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 ZNF529Q6P280 563 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 COLCA1Q6ZS62 124 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 ZNF573Q86YE8 665 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 OR52L2PQ8NGH6 319 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 FAM122AQ96E09 287 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 ABHD14BQ96IU4 210 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 GPN1Q9HCN4 374 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 ANXA10Q9UJ72 324 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 TRAV24A0A0B4J272 114 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 IGKV1D-13A0A0B4J2D9 117 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 SIGLEC5O15389 551 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 ZNF735P0CB33 412 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 IGKV1-13P0DP09 117 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 GNRHRP30968 328 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 PPP1CCP36873 323 aaKnown RBP8.91□□□□□ -0.98
VPS11-208ENST00000621676 RBPJQ06330 500 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 GNMTQ14749 295 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.91□□□□□ -0.98
VPS11-208ENST00000621676 OR1L1Q8NH94 360 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 LAMP3Q9UQV4 416 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.91□□□□□ -0.98
VPS11-208ENST00000621676 PQLC2LA1A4F0 135 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 OR14I1A6ND48 311 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 GSTZ1O43708 216 aaPredicted RBP8.91□□□□□ -0.98
VPS11-208ENST00000621676 COL8A1P27658 744 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 GNG10P50151 68 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 TDGF1P3P51864 188 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 GLDNQ6ZMI3 551 aaPredicted RBP8.91□□□□□ -0.98
VPS11-208ENST00000621676 MRGPRGQ86SM5 289 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 FAM216BQ8N7L0 139 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 OR5AP2Q8NGF4 316 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 ZNF436Q9C0F3 470 aaPredicted RBP8.91□□□□□ -0.98
VPS11-208ENST00000621676 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 NSG2Q9Y328 171 aa8.91□□□□□ -0.98
VPS11-208ENST00000621676 TUBAL3A6NHL2 446 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 IGKV3-15P01624 115 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OPN1MWP04001 364 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OPN1MW2P0DN77 364 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OPN1MW3P0DN78 364 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 PLA2G5P39877 138 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 SELENOVP59797 346 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 COL10A1Q03692 680 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 TLE1Q04724 770 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 GRK1Q15835 563 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OR5A2Q8NGI9 324 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 NRGNQ92686 78 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 PLK3Q9H4B4 646 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 C12orf4Q9NQ89 552 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 DSCAMO60469 2012 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 WNK1Q9H4A3 2382 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 IGLV3-1P01715 115 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 MELTFP08582 738 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OR5AC1P0C628 307 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 RPS2P15880 293 aaKnown RBP8.9□□□□□ -0.98
VPS11-208ENST00000621676 TNFAIP6P98066 277 aaPredicted RBP8.9□□□□□ -0.98
VPS11-208ENST00000621676 P2RY6Q15077 328 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 ANKRD55Q3KP44 614 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 CLEC18BQ6UXF7 455 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OR8G5Q8NG78 346 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 RGCCQ9H4X1 137 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 MEMO1Q9Y316 297 aa8.9□□□□□ -0.98
VPS11-208ENST00000621676 OR2F2O95006 317 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 REG1BP48304 166 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 LYZL2Q7Z4W2 148 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 ZNF565Q8N9K5 539 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 PPP1R1CQ8WVI7 109 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 MRI1Q9BV20 369 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 TAF9BQ9HBM6 251 aa8.9□□□□□ -0.99
VPS11-208ENST00000621676 DLL4Q9NR61 685 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms