RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 UCK1Q9HA47 277 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 BCO1Q9HAY6 547 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 DUSP13Q9UII6 198 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RPH3ALQ9UNE2 315 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 LHFPL6Q9Y693 200 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 NUP210LQ5VU65 1888 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF729A6NN14 1252 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 H3BQ15 152 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 PHOX2AO14813 284 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 MT-CO3P00414 261 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF17P17021 662 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 CFPP27918 469 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 RPS16P62249 146 aaKnown RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 TGFBR3Q03167 851 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF468Q5VIY5 522 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 OR2T2Q6IF00 324 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 SLC25A26Q70HW3 274 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 RAB39BQ96DA2 213 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ALKBH3Q96Q83 286 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 LANCL2Q9NS86 450 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 OSGIN2Q9Y236 505 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 COL6A3P12111 3177 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 FRG2CA6NGY1 282 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 FAM166BA8MTA8 275 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 VSTM5A8MXK1 200 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 PPIHO43447 177 aaKnown RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 DANCRP0C864 163 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 IAPPP10997 89 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 APOBEC1P41238 236 aaKnown RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 HBG1P69891 147 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 HBG2P69892 147 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 MSMO1Q15800 293 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 TMEM41BQ5BJD5 291 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 WDR74Q6RFH5 385 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 DPPA2Q7Z7J5 298 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF808Q8N4W9 903 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 DEFB124Q8NES8 71 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 OR2AE1Q8NHA4 323 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 C1orf147Q96MC9 270 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 TAAR9Q96RI9 348 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 KCNK17Q96T54 332 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 PECRQ9BY49 303 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ARV1Q9H2C2 271 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 UFSP2Q9NUQ7 469 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ZDHHC8Q9ULC8 765 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 PIGBOS1A0A0B4J2F0 54 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ARGFXA6NJG6 315 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 FIGNL2A6NMB9 653 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 SOX15O60248 233 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 NPIPB7O75200 414 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 B4GALT1P15291 398 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 PNLIPP16233 465 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 KITLGP21583 273 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 THBS4P35443 961 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 CYB561P49447 251 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ERVFRD-1P60508 538 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 GRB2P62993 217 aaKnown RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 DLK1P80370 383 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 FAM3AP98173 230 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 HMGN3Q15651 99 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF705AQ6ZN79 300 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 DTX1Q86Y01 620 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 THNSL2Q86YJ6 484 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 CYB561D1Q8N8Q1 229 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 Q8WTZ3 238 aa6.07□□□□□ -1.44
NEDD9-216ENST00000620854 HEYLQ9NQ87 328 aaPredicted RBP6.07□□□□□ -1.44
NEDD9-216ENST00000620854 A0A1W2PR80 420 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 CXCL13O43927 109 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 SOD3P08294 240 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 NDUFB7P17568 137 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 IGLV3-21P80748 117 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ACACAQ13085 2346 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 IL15RAQ13261 267 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 UBE2V2Q15819 145 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 RHBDD2Q6NTF9 364 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ARHGEF39Q8N4T4 335 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 CLDN23Q96B33 292 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 TVP23CQ96ET8 276 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 THOC3Q96J01 351 aaKnown RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 LURAP1Q96LR2 239 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 GUCD1Q96NT3 240 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 PPP1R3CQ9UQK1 317 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 A0A1W2PR77 199 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 OR5H15A6NDH6 313 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 A8MXE2 369 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF814B7Z6K7 855 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 MT-CO2P00403 227 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 MMP9P14780 707 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 AADACP22760 399 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 EDDM3BP56851 147 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 RND3P61587 244 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 PMP22Q01453 160 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 MYBPHQ13203 477 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 TRIP6Q15654 476 aaKnown RBP6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF880Q6PDB4 577 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF429Q86V71 674 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 LHFPL1Q86WI0 220 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 D2HGDHQ8N465 521 aa6.06□□□□□ -1.44
NEDD9-216ENST00000620854 POC1BQ8TC44 478 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms